KEGG   Bos taurus (cow): 407107Help
Entry
407107            CDS       T01008                                 

Gene name
COL4A4
Definition
collagen, type IV, alpha 4
Orthology
K06237  
collagen, type IV, alpha
Organism
bta  Bos taurus (cow)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Protein digestion and absorption
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:bta00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    407107 (COL4A4)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    407107 (COL4A4)
 Cellular Processes
  Cell communication
   04510 Focal adhesion
    407107 (COL4A4)
 Organismal Systems
  Digestive system
   04974 Protein digestion and absorption
    407107 (COL4A4)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    407107 (COL4A4)
   05222 Small cell lung cancer
    407107 (COL4A4)
  Infectious diseases
   05146 Amoebiasis
    407107 (COL4A4)
Exosome [BR:bta04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   407107 (COL4A4)
Heparan sulfate/heparin binding proteins [BR:bta00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  407107 (COL4A4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
BGD-bta: 
Position
2
AA seq 426 aa AA seqDB search
SFCLLVWSGVPGPPGPPGSVDLLKGEPGDCGLPGPPGLPGPPGPPGHKGFPGCDGKHGQK
GPMGFPGPQGPPGSPGPPGDKGLPGPPGRRGPLGPPGSRGEPGPPADLDACPRIPGLPGV
PGPRGPEGTMGLPGMRGPPGPGCKGEPGLDGRRGEDGLPGSPGPPGHKGDMGEAGCPGAP
GPPGPMGDPGPIGFGPGYLSGFLLVLHSQTDGEPTCPMGMPRLWTGYSLLYLEGQERAHN
QDLGLAGSCLPIFSTLPFAYCNIHQVCHYARRNDRSYWLASTAPLPMTPLSEDEIRPYIS
RCAVCEAPAQAVAVHSQDQSIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLE
DFRAAPFLECQGRQGTCHFFANKYSFWLTTVRPDLQFSSAPLPDTLKESHAQRQKISRCQ
VCVKHS
NT seq 1283 nt NT seq  +upstreamnt  +downstreamnt
aatctttttgcctactcgtgtggtcaggagtacccgggcctccaggaccacctgggagtg
tcgaccttctgaaaggagaaccaggagactgtggtctgccagggcctccaggtctcccgg
gcccaccaggccctccaggacacaagggcttcccaggatgtgatggaaaacatggccaga
aaggaccaatgggattcccggggccgcaggggccacctggaagtcctgggccacctggag
acaaaggtttacctggacctccaggcagacgagggcctttgggtcctccgggttccagag
gtgagcctgggcccccagcagacttggatgcctgcccccgaatcccagggcttcctgggg
taccaggccccagaggaccggaaggaaccatggggcttcctggcatgagaggcccgccgg
gaccagggtgcaaaggagagcctgggctggatggcaggaggggtgaggatggcctcccag
ggtcccctgggcctccgggacataaaggtgacatgggagaagcaggctgtccaggagcac
caggccctcctgggcccatgggggatcctgggcccatagggtttggccctggatacctca
gtggcttcctcctggttctccacagtcagacggatggagaacccacctgccccatgggca
tgcccaggctctggactgggtatagtctgctatacctggaaggacaggagagagctcaca
atcaagacctcggtctggcgggctcctgcctccccatctttagcacgctgcccttcgcct
actgcaacatccaccaggtgtgccactatgcccggaggaacgacaggtcctactggctgg
cgagcacagcgcctctgcccatgactccgctctcggaggacgagatccgcccgtacatca
gccgctgcgcagtgtgcgaggcccccgcccaggccgtggcggtgcacagccaagaccagt
ccatccccccatgtccgcgggcctggaggagcctctggatcgggtactccttcctcatgc
acacaggcgctggggaccaaggaggcgggcaggccctcatgtccccaggcagctgcctag
aggatttcagagccgcaccgttcctggaatgccaaggccggcagggaacttgccactttt
ttgccaacaagtatagtttctggctgacaacagtgagacctgacttgcagttttcctctg
caccattaccggacaccttgaaagaaagccatgctcaacgccagaaaatcagcaggtgcc
aggtctgcgtgaagcatagctaa

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