KEGG   Bos taurus (cow): 507554Help
Entry
507554            CDS       T01008                                 

Gene name
RXRA
Definition
(RefSeq) retinoid X receptor, alpha
  KO
K08524  
retinoid X receptor alpha
Organism
bta  Bos taurus (cow)
Pathway
PPAR signaling pathway
PI3K-Akt signaling pathway
Thyroid hormone signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Bile secretion
Hepatitis C
Pathways in cancer
Transcriptional misregulation in cancer
Thyroid cancer
Small cell lung cancer
Non-small cell lung cancer
Brite
KEGG Orthology (KO) [BR:bta00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    507554 (RXRA)
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    507554 (RXRA)
   03320 PPAR signaling pathway
    507554 (RXRA)
   04919 Thyroid hormone signaling pathway
    507554 (RXRA)
  Digestive system
   04976 Bile secretion
    507554 (RXRA)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    507554 (RXRA)
   05202 Transcriptional misregulation in cancers
    507554 (RXRA)
   05216 Thyroid cancer
    507554 (RXRA)
   05222 Small cell lung cancer
    507554 (RXRA)
   05223 Non-small cell lung cancer
    507554 (RXRA)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    507554 (RXRA)
  Infectious diseases
   05160 Hepatitis C
    507554 (RXRA)
Transcription factors [BR:bta03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    507554 (RXRA)
Nuclear receptors [BR:bta03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   507554 (RXRA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
BGD-bta: 
Position
11
AA seq 439 aa AA seqDB search
MAAPSLHPSLGPSIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRGESEVESSSSANEDMPVEKILEAELAVEPKTETYVEANVGLNPSSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt
atggccgccccctcgctgcacccctccctggggcccagcatcggctcctcgctcggctct
ccgggacagctgcactcacccatcagcaccctcagctcgcccatcaacggcatgggcccg
cccttctcggtcatcagttcccccatgggcccgcactctatgtcggtgcccaccacaccc
accctgggctttggcaccggcagcccccagctcagctcgcccatgaaccccgtgagcagc
agcgaggacatcaagcccccactgggcctcaatggtgtcctcaaagtgccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgcggggaccgctcctca
ggcaagcactacggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacctgccgggacaacaaggactgcctgattgacaagcggcag
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgcgaa
gccgtgcaggaggagcggcagcggggcaaggaccggggcgagagcgaggtggagtccagc
agcagcgccaacgaggacatgccagtggagaagatcctggaggccgagctggccgtcgag
cccaagaccgagacctacgtggaggcgaacgtggggctgaaccccagctcgcccaacgac
cccgtcaccaacatctgccaagcggctgacaagcagctcttcacactggtggagtgggcc
aagcggatcccgcacttctccgagctgcccctggacgaccaggtcatcctgctgcgagca
ggctggaacgagctgctcatcgcctccttctcgcaccgctccatcgccgtgaaggacggc
atcctcctggccaccgggctgcacgtacatcgcaacagcgcccacagcgcaggcgtgggc
gccattttcgacagggtgctgacggagctggtgtccaagatgcgggacatgcagatggac
aagacggagctgggctgcctgcgcgccatcgtcctcttcaaccccgactccaaggggctc
tcaaacccagccgaggtggaggcgcttcgtgagaaggtctatgcgtccctggaggcgtac
tgcaaacacaagtaccccgagcagccaggaaggttcgccaagctgctgctgcgcctgccc
gctctgcgctccattggcctcaagtgcctggagcacctcttcttcttcaagctcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaggccccgcaccagatgacttag

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