KEGG   Bos taurus (cow): 510833Help
Entry
510833            CDS       T01008                                 

Gene name
COL3A1
Definition
collagen, type III, alpha 1
Orthology
K06236  
collagen, type I/II/III/V/XI/XXIV/XXVII, alpha
Organism
bta  Bos taurus (cow)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Protein digestion and absorption
Amoebiasis
Class
Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:bta04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:bta04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:bta04510]
Organismal Systems; Digestive system; Protein digestion and absorption [PATH:bta04974]
Human Diseases; Infectious diseases; Amoebiasis [PATH:bta05146]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
BGD-bta: 
Ensembl: 
UniProt: 
Position
2q12
AA seq 1466 aa AA seqDB search
MMSFVQKGTWLLFALLHPTVILAQQEAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGPPGSPGSPGSPGPPGICESCPTGGQNYSPQYEAYDVKSGVAGGGIAGYPGPAGPPG
PPGPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG
ERGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGVPGENGAPGPMG
PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG
SSGAPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPPG
TNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLPG
AAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAGPRGVAGEPGRDGLPGGPGLRGIPG
SPGGPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG
GPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEPG
PKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPPGPPGSAG
TPGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKG
ESGAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG
AAGPAGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAPG
KDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGARGLAG
PPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG
LPGRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAG
SRGPPGPQGPRGDKGETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRG
PVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAG
GVAAIAGVGAEKAGGFAPYYGDEPIDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPAR
NCRDLKFCHPELQSGEYWVDPNQGCKLDAIKVYCNMETGETCISASPLTIPQKNWWTDSG
AEKKHVWFGESMEGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD
HASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFQYQTRKAVRLP
IVDIAPYDIGGPDQEFGADIGPVCFL
NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt
atgatgagctttgtgcaaaaggggacctggttacttttcgctctgcttcatcccactgtt
attttggcacaacaggaagctgttgacggaggatgctcccatctcggtcagtcttatgca
gatagagatgtatggaaaccagaaccgtgccaaatatgcgtctgtgactcaggatccgtt
ctctgtgatgacataatatgtgacgaccaagaattagactgccccaaccctgaaatcccg
tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctaat
ggtcaaggacctcaaggccccaagggagatccaggtcctcctggtattcctgggcgaaat
ggcgatcctggtcctccaggatcaccaggctccccaggttctcccggccctcctggaatc
tgtgaatcatgtcctactggtggccagaactattctccccagtacgaagcatatgatgtc
aagtctggagtagcaggaggaggaatcgcaggctatcctgggccagctggtcctcctggc
ccacccggaccccctggcacatctggccatcctggtgcccctggcgctccaggataccaa
ggtccccccggtgaacctgggcaagctggtccggcaggtcctccaggacctcctggtgct
ataggtccatctggccctgctggaaaagatggggaatcaggaagacccggacgacctgga
gagcgaggatttcctggccctcctggtatgaaaggcccagctggtatgcctggattccct
ggtatgaaaggacacagaggctttgatggacgaaatggagagaaaggcgaaactggtgct
cctggattaaagggggaaaatggcgttccaggtgaaaatggagctcctggacccatgggt
ccaagaggggctcccggtgagagaggacggccaggacttcctggagccgcaggggctcga
ggtaatgatggagctcgaggaagtgatggacaaccgggcccccctggtcctcctggaact
gcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcctggt
tcaagtggcgcccctggacaaagaggagaacctggacctcagggacatgctggtgctcca
ggtccccctgggcctcctgggagtaatggtagtcctggtggcaaaggtgaaatgggtcct
gctggcattcctggggctcctgggctgataggagctcgtggtcctccagggccacctggc
accaatggtgttcccgggcaacgaggtgctgcaggtgaacccggtaagaatggagccaaa
ggagacccaggaccacgtggggaacgcggagaagctggttctccaggtatcgcaggacct
aagggtgaagatggcaaagatggttctcctggagaacctggtgcaaatggacttcctgga
gctgcaggagaaaggggtgtgcctggattccgaggacctgctggagcaaatggccttcca
ggagaaaagggtcctcctggggaccgtggtggcccaggccctgcagggcccagaggtgtt
gctggagagcccggcagagatggtctccctggaggtccaggattgaggggtattcctggt
agccccggaggaccaggcagtgatgggaaaccagggcctcctggaagccaaggagagacg
ggtcgacccggtcctccaggttcacctggtccgcgaggccagcctggtgtcatgggcttc
cctggtcccaaaggaaacgatggtgctcctggaaaaaatggagaacgaggtggccctgga
ggtcctggccctcagggtcctgctggaaagaatggtgagaccggacctcagggtcctcca
ggacctactggcccttctggtgacaaaggagacacaggaccccctggtccacaaggacta
caaggcttgcctggaacgagtggtcccccaggagaaaacggaaaacctggtgaacctggt
ccaaagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgctccc
ggtgaacgcggacctcctggagcaggagggccccctggacctagaggtggagctggcccc
cctggtcccgaaggaggaaagggtgctgctggtccccctgggccacctggttctgctggt
acacctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggtccaaag
ggtgataagggtgagcctggcagctcaggtgtcgatggtgctccagggaaagatggtcca
cggggtcccactggtcccattggtcctcctggcccagctggtcagcctggagataagggt
gaaagtggtgcccctggagttccgggtatagctggtcctcgcggtggccctggtgagaga
ggcgaacaggggcccccaggacctgctggcttccctggtgctcctggccagaatggtgag
cctggtgctaaaggagaaagaggcgctcctggtgagaaaggtgaaggaggccctcccgga
gccgcaggacccgccggaggttctgggcctgccggtcccccaggcccccaaggtgtcaaa
ggcgaacgtggcagtcctggtggtcctggtgctgctggcttccccggtggtcgtggtcct
cctggccctcctggcagtaatggtaacccaggccccccaggctccagtggtgctccaggc
aaagatggtcccccaggtccacctggcagtaatggtgctcctggcagccccgggatctct
ggaccaaagggtgattctggtccaccaggtgagaggggagcacctggcccccagggccct
ccgggagctccaggcccactaggaattgcaggacttactggagcacgaggtcttgcaggc
ccaccaggcatgccaggtgctaggggcagccccggcccacagggcatcaagggtgaaaat
ggtaaaccaggacctagtggtcagaatggagaacgtggtcctcctggcccccagggtctt
cctggtctggctggtacagctggtgagcctggaagagatggaaaccctggatcagatggt
ctgccaggccgagatggagctccaggtgccaagggtgaccgtggtgaaaatggctctcct
ggtgcccctggagctcctggtcacccaggccctcctggtcctgtcggtccagctggaaag
agcggtgacagaggagaaactggccctgctggtccttctggggcccccggtcctgccgga
tcaagaggtcctcctggtccccaaggcccacgcggtgacaaaggggaaaccggtgagcgt
ggtgctatgggcatcaaaggacatcgcggattccctggcaacccaggggcccccggatct
ccgggtcccgctggtcatcaaggtgcagttggcagtccaggccctgcaggccccagagga
cctgttggacctagcgggccccctggaaaggacggagcaagtggacaccctggtcccatt
ggaccaccggggccccgaggtaacagaggtgaaagaggatctgagggctccccaggccac
ccaggacaaccaggccctcctggacctcctggtgcccctggtccatgttgtggtgctggc
ggggttgctgccattgctggtgttggagccgaaaaagctggtggttttgccccatattat
ggagatgaaccgatagatttcaaaatcaacaccgatgagattatgacctcactcaaatca
gtcaatggacaaatagaaagcctcattagtcctgatggttcccgtaaaaaccctgcacgg
aactgcagggacctgaaattctgccatcctgaactccagagtggagaatattgggttgat
cctaaccaaggttgcaaattggatgctattaaagtctactgtaacatggaaactggggaa
acgtgcataagtgccagtcctttgactatcccacagaagaactggtggacagattctggt
gctgagaagaaacatgtttggtttggagaatccatggagggtggttttcagtttagctat
ggcaatcctgaacttcccgaagacgtcctcgatgtccagctggcattcctccgacttctc
tccagccgggcctctcagaacatcacatatcactgcaagaatagcattgcatacatggat
catgccagtgggaatgtaaagaaagccttgaagctgatggggtcaaatgaaggtgaattc
aaggctgaaggaaatagcaaattcacatacacagttctggaggatggttgcacaaaacac
actggggaatggggcaaaacagtcttccagtatcaaacacgcaaggccgtcagactacct
attgtagatattgcaccctatgatatcggtggtcctgatcaagaatttggtgcggacatt
ggccctgtttgctttttataa

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