KEGG   Bos taurus (cow): 519513
Entry
519513            CDS       T01008                                 
Symbol
BRCC3
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
bta  Bos taurus (cow)
Pathway
bta03440  Homologous recombination
bta04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    519513 (BRCC3)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    519513 (BRCC3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bta01002]
    519513 (BRCC3)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bta04121]
    519513 (BRCC3)
   03036 Chromosome and associated proteins [BR:bta03036]
    519513 (BRCC3)
   03400 DNA repair and recombination proteins [BR:bta03400]
    519513 (BRCC3)
Peptidases and inhibitors [BR:bta01002]
 Metallo peptidases
  Family M67
   519513 (BRCC3)
Ubiquitin system [BR:bta04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    519513 (BRCC3)
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    519513 (BRCC3)
   BRISC complex
    519513 (BRCC3)
Chromosome and associated proteins [BR:bta03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     519513 (BRCC3)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     519513 (BRCC3)
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB UPF0172
Other DBs
NCBI-GeneID: 519513
NCBI-ProteinID: NP_001069258
BGD-bta: BT26714
Ensembl: ENSBTAG00000007817
VGNC: 26555
UniProt: A5PJP6
Position
X:complement(35885699..35964151)
AA seq 291 aa
MAVQVVQAVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDLRNDPKFTYTGTEMR
TVAEKVDTVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQK
SSEYERIEIPIHIVPHVTIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNG
SVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQELSSLE
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcggtgcaggtggtgcaggcggtgcaagcggtccatctggagtcagacgccttcctg
gtgtgtctcaatcacgctctgagcacggagaaggaagaggtgatggggctgtgcattggg
gagttaaatgatgacttaaggaatgaccccaaatttacatatactggaactgaaatgcgc
acagttgctgaaaaggttgacaccgtcagaattgttcacattcattctgtcatcatcctg
cgtcgttccgataagaggaaggatcgtgtggaaatttctccagagcagctgtctgcggct
tcaacagaggcagagaggttggctgaactgacaggtcgtcccatgagagttgtgggttgg
tatcactcccatccccatataactgtttggccttcacatgttgatgtccgcacacaagcc
atgtaccagatgatggatcaaggttttgtaggacttatcttttcctgcttcatagaagat
aaaaatacaaagactggacgggtactctatacttgctttcaatccatacaggcccaaaag
agctcagagtatgagagaattgaaatcccaattcatattgtacctcacgtaaccattggg
aaagtatgccttgagtcagcagttgagctgcccaagatcctgtgccaagaagaacaagat
gcatataggaggatccacagccttacacatctggactcagtaaccaagatccataatggc
tcagtatttaccaagaatctgtgcagtcagatgtcagcggtcagcggacctctactgcag
tggttggaggacagactggagcaaaaccaacagcatgtgcaggagctgcaacaagaaaag
gaagagcttctgcaagaactttcttctctagaataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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