KEGG   Bos taurus (cow): 523701
Entry
523701            CDS       T01008                                 
Symbol
NCAN
Name
(RefSeq) neurocan core protein precursor
  KO
K06794  neurocan core protein
Organism
bta  Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:bta00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bta00535]
    523701 (NCAN)
   00536 Glycosaminoglycan binding proteins [BR:bta00536]
    523701 (NCAN)
   04091 Lectins [BR:bta04091]
    523701 (NCAN)
Proteoglycans [BR:bta00535]
 Extracellular matrix (ECM) proteoglycans
  Aggrecan / versican family
   523701 (NCAN)
Glycosaminoglycan binding proteins [BR:bta00536]
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   523701 (NCAN)
Lectins [BR:bta04091]
 C-Type lectins
  Group 1: Proteoglycan core proteins
   523701 (NCAN)
SSDB
Motif
Pfam: Xlink Lectin_C Sushi EGF V-set hEGF EGF_2 JAG1-like_EGF2
Other DBs
NCBI-GeneID: 523701
NCBI-ProteinID: NP_001180011
BGD-bta: BT24797
Ensembl: ENSBTAG00000001764
VGNC: 31900
UniProt: F1N2Y8
Position
7:complement(4021099..4051593)
AA seq 1347 aa
MGALSVWVSGLLTLQMLLFVAGEQGPQHTTAAAATAEKGLHMQKVGSGSVRAALAELVAL
PCLFSLRPRPGAAREAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYP
RHRVNATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRAALDRYSLTFAE
AQEACLLNSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGV
RNYGRRDPRELYDVYCFARELGGEVFYVGLARRLTLAGARAQCRRQGAVLASVGQLHLAW
HEGLDQCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFANRTGFPAPGERFDAYCFR
AHHPTSQHGDPETPSSGDEGEILSAEGPPAGELEPSLQEEEEVVTPDIQEPLVSSGEEES
LILAEKQESQATPSRAPGVPTLASSPALEAEEVWLSTVAPSHSSVEAGTVVGTHTDTAPA
STTPRKRERFKGLNGRHFQQQEPQQGLKGALEASIQPPTPEAAENYVEPPMTTGTTDALG
SGQSQSPWAVLTNEVEMPRAGSLGGRSPQEPWLWLPTVVPPIIPDPSRALGLELGEAKRF
SMRPVTSDLPWSPSETTPNPSNGPSPTPWKASPVAISPDLPVMAMLRAPKLWLLSQEPPT
SLPTEASGVKGHSEAMATALPSPASEIEASPQDPIHLEVYSPPSSSGLAGQDGESTSLSL
STSPNSPGADFGNTRGASPTELSKAEHPGSSPQASVDWNVVADITISEPATEPMGARGVS
ESESGVFNTAESPTSSLQASMDKTQEIWASLHREGLDPHSPSAPLGVPEVPLMPKFTPGL
GPWAATDGGVTVDPMASTVTLDTSDAGGHWEPGSHMVEGAESPTLSPQMAVDTSVVTSVT
SLDLGDKVRVLAVFTVASSSSQPHPEPESQLVTQGTLGALEPPQEGSHSGDPILPPWTPT
AANKDEPISVSSGEPTVPWDSPSTLLPASLGPEEFELEVLMGSPSVESFWEEAASGEEPA
LPGTPANGSAEEGPLDPCENNPCLHGGTCRANGTMYGCSCDQGFAGENCEIDIDDCISSP
CENGGTCIDEVNAFICLCLPSYGGSLCEKDTEGCDHGWHKFQGHCYRYFAHRRAWEDAER
DCRRRAGHLTSIHSSEEHNFINSFGRENTWIGLNDRIVERDFQWTDNTGLQFENWRENQP
DNFFAGGEDCVVMVAHESGRWNDVPCNYNLPYVCKKGTVLCGPPPAVENASPIGARKAKY
NVHATVRYQCDEGFAQHHVAIIRCRSNGKWDRPQIICTKPRRSHRMRRHHHHHQHHHQHR
HHKSRKERRKHKKHPAEDWEKEEGNFC
NT seq 4044 nt   +upstreamnt  +downstreamnt
atgggggccttgtctgtctgggtctcaggcctcctgactctccagatgcttctctttgtg
gctggggagcagggcccacagcacaccaccgcagctgcagccactgctgagaaggggctc
cacatgcagaaagtggggtctgggtcagtccgggctgccctggcagagttggtggccctg
ccctgtctctttagcctgcggccacggccaggtgcagctcgagaagccccacggatcaaa
tggaccaaggtgcggactgcatcaggccagcggcaggacttgcccatcctagtagccaag
gacaacgtggtccgagtcgccaagggctggcagggacgtgtgtcacttcccgcctacccc
cggcaccgggtcaacgccacgttgctgctgggaccactgagggccagcgactccgggctc
taccgctgccaggtggtgaggggcatcgaggatgagcaggacctggtgcccctggaggtg
acgggtgttgtgttccactaccgagcagccctggatcgctactctctaacttttgctgag
gctcaggaggcctgtcttctcaactcagccaccattgcagccccgcggcacctgcaggct
gcctttgaggacggctttgacaactgcgatgccgggtggctttctgaccgcactgttcgg
tatcctatcacccagtcccgtcctggttgctatggtgaccgtagcagccttccgggggtg
aggaactatgggaggcgagacccacgggaactctacgatgtgtattgctttgcccgtgag
ctggggggcgaggtcttctacgtaggcctggcccgccgcctgacactggccggcgcacgt
gcccagtgccgacgccagggcgccgtgctggcctcggtaggacagctgcacctggcctgg
catgagggcctggaccagtgcgacccgggctggctggccgacggcagcgtgcgctacccg
atccagacgccgcgtcggcgctgcggtggcccagcccctggcgtgcgcaccgtataccgc
tttgccaaccgcaccggcttcccggcacctggagagcgcttcgatgcctactgcttcaga
gctcatcaccccacatcccaacatggagacccagagaccccctcatctggagatgagggg
gagattctgtcggcagaagggccccccgctggagaattggagcccagtctgcaggaggag
gaggaggtagtcaccccggacatccaggagcctctggtgtctagtggggaagaagagtct
ctgatcttggcagagaagcaggaatctcaagcgacccccagccgtgcccctggggtcccc
acattggcctcaagtcctgccctggaggctgaggaggtgtggctgagcacagtggccccc
agccacagcagcgtggaggcaggcactgtggtgggcacgcacacagacacagccccagca
agcaccacgcccaggaagagggagcgctttaaagggctgaacgggcgccacttccagcaa
caggagccccagcaagggctgaagggggcactcgaggccagcatccagccccccacacca
gaggctgctgagaattatgtggagcctcccatgaccactggaaccacagacgccttgggg
agcggccagagccaaagcccctgggctgtgctgacaaatgaggtggaaatgcccagagct
ggttcccttggtggcaggagcccccaagagccctggctgtggctcccaaccgtggtccca
cccatcatcccagaccccagcagagcccttggcctggaactaggagaagccaagcgcttt
agtatgagaccagtcacttccgacctgccctggtccccctcagagaccactcccaaccct
tccaatggccccagccctaccccctggaaggcttctcctgtggccatttctccagacctc
cctgtcatggccatgcttcgcgcccccaaactgtggctcctatcacaggagcctcctaca
tccctccccactgaggccagtggagtcaaggggcatagtgaggccatggccactgccctg
ccctcccctgcctcagaaatcgaagccagcccacaggatcccatccatctggaagtgtac
tccccgccttcctcctcgggcctggcaggacaagatggagagtccacatccctgtcactc
agcaccagtcccaactcccctggagcagactttggaaacactagaggggccagccctact
gagctcagcaaagctgagcaccccggatccagcccacaggcctctgtggactggaatgtg
gtggcagatatcactatttctgagcctgccactgagcccatgggagccagaggcgtctcg
gagtctgagtctggggtcttcaacacagcagagagtcctacttccagcttgcaggcctcc
atggacaagacgcaggaaatatgggcctcgctgcacagggaagggctggacccccactcc
ccatctgcacccttgggggtccctgaagtccccttgatgcccaagttcaccccaggtttg
gggccttgggctgctacagatggaggagtcacagtggatcctatggcttccacagtcaca
ctggacaccagcgatgctggtgggcattgggaacctggatcccacatggttgagggagca
gaaagccccaccttgagccctcaaatggctgtggacacaagtgtggtgacatccgtcacg
tccttggacctgggggacaaggtcagggtcctggccgtgttcacagtggcctcctcaagc
tcccagccccacccagagccagagagccagctggtgacccagggaaccctgggagccttg
gagcctccacaggagggcagccactcaggggaccccattcttcctccttggacgccgaca
gcagccaacaaggatgagcccatttcagtttcctcgggggagcctacagtgccttgggac
tcccccagcaccctgctgcctgcctctctgggcccagaggaatttgagctggaggtcctg
atggggagccccagtgtggagagcttctgggaggaggcagcaagtggagaggagcctgcc
ctgccagggactcctgcaaatgggagtgcagaggagggccccttggatccctgtgagaac
aacccttgcctgcacggaggcacctgtagagccaatggcaccatgtacggctgcagctgt
gaccaggggttcgctggagagaactgtgagatcgatattgacgattgcatctccagcccc
tgtgagaacggtggcacctgcatcgacgaggtcaacgccttcatctgcctttgcctcccc
agctatgggggaagcctctgcgagaaagatacagagggctgtgaccacggctggcacaag
tttcagggccactgctaccgttactttgcccaccggcgggcatgggaggacgccgagagg
gactgccgccgccgagccggccacctaaccagcatccactcatcagaagaacacaacttc
attaacagttttgggcgtgaaaacacatggatcggcttgaacgacaggatcgtggaaagg
gatttccagtggacggacaacacagggctgcaatttgagaactggcgggaaaatcagccg
gacaacttcttcgcgggcggggaggactgtgtggtgatggttgcacatgagagcgggcgc
tggaacgacgttccctgcaactacaacctcccctacgtctgtaagaagggcacagtgctg
tgtggtccccctccagcggtggagaatgcctcgcccattggtgcccgcaaggccaagtat
aatgtccatgccacagtacgctaccagtgtgatgaaggatttgcccagcaccatgtggcc
atcatccggtgccggagcaatggcaaatgggaccggccccagatcatctgcaccaaaccc
agaaggtcccataggatgcggcgacaccaccatcaccaccagcatcaccaccagcatcgc
caccacaaatctcgcaaggagcgcagaaaacacaagaagcacccagcagaggactgggaa
aaggaagaagggaatttctgttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (75)   

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