KEGG   Bos taurus (cow): 539578
Entry
539578            CDS       T01008                                 
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
  KO
K04956  hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
bta  Bos taurus (cow)
Pathway
bta04929  GnRH secretion
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09152 Endocrine system
   04929 GnRH secretion
    539578 (HCN3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:bta04040]
    539578 (HCN3)
Ion channels [BR:bta04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   539578 (HCN3)
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2
Other DBs
NCBI-GeneID: 539578
NCBI-ProteinID: NP_001179207
BGD-bta: BT15729
Ensembl: ENSBTAG00000017055
VGNC: 29778
Position
3:complement(15354861..15363825)
AA seq 783 aa
MEAEQRPTTGANDGATPGLEAAPPAAPASTTTASGPVPGSRPGPEPKRRQLGTLLQPTVN
KFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFF
KEENSPPWIVFNVLSDTFFLMDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLI
SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF
HMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSISHMVNHSWGRQY
SHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR
QYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFT
CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR
GARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFET
VAMDRLRRIGKKNSILQRKRSEPSPSSSGGVMEQHLVQHDRDMARGVRGLAPSTGAQLSG
KPVLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPVTLLARSARRSAGAGSPASP
LVPVRAGPLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRP
LSASQPSLPQRAAGDGSPGRKGSGSERLPPSGLLTKPPGTAQLPRLPVPEPATPRGPQLS
ANM
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggaggcggagcagcggccaacgactggggccaacgacggggcgacccctgggctggag
gctgcgcctcctgctgccccggcgtctacaaccacagcctcgggtccggtcccggggtcc
aggcccgggcccgagcccaagaggaggcagctcgggaccctgctccagcccacggtcaac
aagttctcccttcgcgtgttcggcagccacaaagcagtggaaatcgagcaggagcgggtc
aagtcagcgggggcctggatcatccacccgtacagcgacttccggttttactgggacctg
atcatgctcctgctgatggtggggaacctcattgtgctacccgtgggcatcaccttcttc
aaggaagagaactctccaccttggattgtcttcaacgtcctctctgacactttcttcctg
atggatctggtgctcaacttccgcacaggcattgtggtagaggagggtgctgagatcctg
ctggcaccgcgggccatccgcacacgctacctgcgcacctggttcctggttgacctcatc
tcctctattcctgtggattacatctttctggtggtggagctggagccacgactggatgct
gaggtctacaaaacagcgcgggccctgcgcatcgtgcgtttcaccaagattctcagcctg
ctgcggctgctccgcctctcccgcctcatccgctacatacaccagtgggaggagatcttt
cacatgacctatgacctggccagtgctgtggttcgcatcttcaacctcatcggaatgatg
ctgctgctgtgtcactgggatggctgtctgcagttcctggtccccatgctgcaagacttc
cctcctgactgctgggtctccatcagccacatggtgaaccactcatggggccgccagtat
tcccacgccctgttcaaggccatgagccacatgctctgcattggctacgggcagcaggca
cctgtaggcatgcccgacgtctggctcaccatgctcagcatgatcgtgggtgccacgtgc
tacgccatgttcatcggtcatgccaccgccctcatccagtccctggactcctcccggcgt
cagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagttgccagct
gatacacggcaacgcatccatgagtactatgagcaccgctaccagggcaagatgttcgat
gaggaaagcatcctaggcgagctgagcgaaccacttcgggaggagatcattaacttcacc
tgccggggcctggtggcccacatgccgctgtttgcccatgctgatcccagcttcgtcacg
gccgtgctcaccaagctacgctttgaggtcttccagccgggggacctcgtggtgcgtgag
ggctccgtgggcaggaagatgtacttcatccagcatgggctgctcagtgtgctggcacgt
ggcgcccgggacacccgcctcactgacggatcctactttggggagatctgcctgctgact
cggggccgacgcacagccagcgtgcgtgcggacacctactgccgcctgtactcactcagc
gtggaccatttcaacgccgtgctcgaggagttccctatgatgcgccgggccttcgagaca
gtggccatggatcggctgcgccgtatcggtaagaagaattccatactgcagcggaagcgc
tctgagccaagtccgagcagcagcgggggcgtcatggagcagcacttggttcaacacgac
agggatatggcccggggtgttcggggcctggcgcccagcacaggcgctcagctcagtgga
aagccggtgctgtgggagccactagtgcacgcacccctgcaagcagccgccgtgacctcc
aatgtggccattgccttgacgcaccagcggggccctcttcccctctcgcccgactctcca
gtcaccctccttgctcgctctgctcgaagatcagctggagcaggctccccagcgtccccc
ctggtgcctgtccgagctggccctctagcccgggggccttgggcatccacttcccgcctg
ccggccccgcccgcccgaaccctccatgccagcctatcccgggctgggcgctcacaggtg
tcactgctggggcctcccccaggagggggtggacggcgactaggacctcggggccgcccg
ctctcagcctcccaaccttctctgcctcagagggcagcgggtgatggctctcctgggcgt
aagggctcaggaagtgaacgcctgcccccttcagggctcctgaccaagcctccagggaca
gcccagctccccaggctgccagtgcctgagccagctactccccggggcccccagctgtct
gccaacatgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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