KEGG   Bombus terrestris (buff-tailed bumblebee): 100649459
Entry
100649459         CDS       T04364                                 
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100649459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bter03021]
    100649459
Transcription machinery [BR:bter03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     100649459
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 100649459
NCBI-ProteinID: XP_012168479
Position
LG B10:11528540..11531585
AA seq 536 aa
MTSSAVPKVSLVPSIQEFSIRVPKNNKKKHNVMRFNATLNVDFSKWTQVKMERENNMKEY
KGIEEEIPKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMNYFS
LMLRKRLRNDEEGADDEEMLEGGKGKKPSKKEKDLKISEMDEWMNSDDDDSASDDEENKK
NSDEEDDSKKKRKAKVNIISDIKKKKKNASDDEAFEESDDGDEEGRECDYISDSSDSESE
LEQQKEIKSVAEEDALRKLLASDEDDDDEEQADKKDGEEEKDEDDEHKDKDDKDKDKTNK
DADKKKDKKKKKKQSKKKDVKKLASGKDSSSDFSSDSDSGSDTIKEKDNKKSNSAHSSRS
ATPIPAAMLDNLKRKQSGSPDLSQAKKLKLDNFNLVPVTSYIPGVSESGITEDAVRRYLM
RKPMTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPTKQTXKNKMYLSIKTQSN
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgacatcgtctgcggttccaaaggtttcacttgtgccttccatacaggaattcagtatc
agagtaccaaaaaataacaagaaaaagcacaatgtgatgcgttttaatgccacattaaat
gttgatttttcaaaatggactcaagtgaaaatggaacgtgaaaataatatgaaggaatac
aaaggaatagaagaggaaataccaaaattcggagctggctctgaatttggacgagatgcg
agagaagaagcaagaagaaaaaaatttggcattacaagtagaaaatataaaccagaagat
caaccttggattttaaaatctggaggaaaaactgggaaaaagtttaaaggtataagggaa
ggtggtgtgagtgaaaatgctgcatattatgtttttacacatgctgctgatggagctata
gaagcatttccattgcacgaatggtataattttcaaccaattcaaaggtacaaagcattg
agcgcagaagaagcagagcaggagtttagtcgtagaaataaagtaatgaattatttttca
ttgatgttgcgtaaaagacttaggaatgatgaggagggtgcagatgacgaggaaatgtta
gaaggtggaaaagggaaaaagccaagtaaaaaggagaaagatttaaaaatatctgaaatg
gatgagtggatgaatagcgatgatgatgattcagctagtgatgacgaggaaaataaaaaa
aattccgatgaagaagatgacagtaagaaaaaaagaaaggcaaaggtgaacattatttct
gatattaaaaagaagaagaaaaacgcttctgatgatgaagcatttgaagaaagtgacgat
ggggatgaagaaggtagagaatgtgattatatttctgactcgtccgattctgaatcagaa
ttggaacaacaaaaagaaattaagtcggttgcggaagaagatgcattgagaaaattactt
gcttctgatgaagatgacgatgacgaagaacaggcagataaaaaggatggtgaagaagaa
aaagacgaagatgatgaacataaggataaagatgataaggataaagataagaccaataaa
gatgcagataagaaaaaagataaaaagaaaaagaagaaacaatctaagaaaaaggatgta
aaaaagcttgcgtcaggaaaagattcttctagtgacttttccagtgattcagattcagga
tctgatacaataaaggaaaaagataataaaaaatctaatagtgctcatagttcaagatct
gcaactcctataccagccgcgatgttagataatttaaaaagaaaacaatctggatctcca
gatttatcgcaagcaaaaaaattgaaattggataatttcaatttagtaccagtaacttct
tacattccaggagtcagtgaatccggcatcacagaagatgcagtaaggcgttatcttatg
cgtaaaccaatgacaacaacggaacttttacaaaagtttaaatcgaagaaaactggtctt
acttcggaacaattagttaatgtgatgactcaaatactgaaaaagataaatccaactaag
cagacanataaaaacaaaatgtatttatctattaaaacacaatctaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system