KEGG   Bombus terrestris (buff-tailed bumblebee): 100650425
Entry
100650425         CDS       T04364                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
bter  Bombus terrestris (buff-tailed bumblebee)
Pathway
bter03030  DNA replication
bter03410  Base excision repair
bter03420  Nucleotide excision repair
bter03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bter00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100650425
   03410 Base excision repair
    100650425
   03420 Nucleotide excision repair
    100650425
   03430 Mismatch repair
    100650425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bter03032]
    100650425
   03036 Chromosome and associated proteins [BR:bter03036]
    100650425
   03400 DNA repair and recombination proteins [BR:bter03400]
    100650425
DNA replication proteins [BR:bter03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100650425
  DNA Replication Termination Factors
   ELG1-RFC complex
    100650425
Chromosome and associated proteins [BR:bter03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100650425
DNA repair and recombination proteins [BR:bter03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100650425
  Check point factors
   HRAD17(Rad24)-RFC complex
    100650425
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 Rad17 AAA_16 AAA_24 Mg_chelatase Viral_helicase1 AAA_18 AAA_11 RuvB_N nSTAND3 AAA_assoc_2 AAA_19 AAA_28 AAA_5 DEAD NTPase_1 ABC_tran DUF2247 MeaB AAA_23 MCM RNA_helicase SecA_DEAD AAA_2 cpSF2-GREB1 AAA_3 MipZ AAA_25
Other DBs
NCBI-GeneID: 100650425
NCBI-ProteinID: XP_003402870
UniProt: A0A9B0CGJ7
Position
Unknown
AA seq 351 aa
MGVENTVDEPMNVEVVPSTSGYNIKNKEKDKKSSNLPWIEKYRPQIFSDIVGNEDTVSRL
SVFAEHGNCPNIIIAGPPGVGKTTTILCLARILLGPVFKEAVLELNASNERGIDVVRNKI
KMFAQKKVNLAKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNTSEKIIEP
IQSRCAMLRYGKLSDAQILAKIIEVCQKEDVSHTDDGLEAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLELCAQGKISKAYGIMEHLWKMGYSAEDLVSNIF
RVCTNLSIEEPLKLDFIKEIGITHLGIVDGINSLLQMNSLLARLCQKSMQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggagttgagaataccgtcgatgaacctatgaatgttgaagttgtgccatcgacgagt
ggttataatataaaaaataaagaaaaagataagaaatcaagcaatttgccatggattgaa
aagtatcgaccacaaatattttctgacattgttggtaatgaagacacagtatccagatta
tcggtatttgctgaacatgggaactgtcctaatattatcattgctggtccaccgggagtt
ggtaaaactacaactatattatgtttggcacgtattttattaggaccagtgtttaaggaa
gcagtattagaattaaatgcgtcaaatgagagaggaatagatgttgtcagaaataaaatt
aaaatgtttgcccaaaagaaggtaaatttggcaaaaggtaagcacaaaataataattttg
gatgaagctgatagcatgactgatggtgcacaacaagcattacgtaggacaatggaaata
tatagcaatacaactagatttgcactagcttgtaatacaagtgaaaaaattatcgagccg
atacagtcacgctgtgccatgttaagatatggaaaattatcagatgcgcaaattttagca
aagattattgaagtttgtcagaaagaagatgtttcacatacagatgatggtttagaagca
atagtatttactgcacagggtgatatgagacaggctctaaataatttacaatcaacttat
aatggttttggacatgtaaacagtgagaatgtttttaaagtctgtgacgaaccacatcca
ttacttgttaaagaaatgttggaattatgtgcacagggtaaaatttccaaagcatatggg
ataatggagcatttatggaaaatgggatattctgcagaagatttggtcagtaatatattc
agagtttgtacaaatctatccatcgaagaaccattaaaattagattttataaaagagatt
ggaataactcatttaggaatagtggatggaattaatagtttactacaaatgaacagtctt
cttgctagactttgtcaaaaaagtatgcagaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (32)   
   Pfam (32)   
All databases (54)   

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