KEGG   Bacillus thuringiensis serovar finitimus YBT-020: YBT020_22550
Entry
YBT020_22550      CDS       T01839                                 
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
btf  Bacillus thuringiensis serovar finitimus YBT-020
Pathway
btf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:btf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    YBT020_22550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:btf03400]
    YBT020_22550
Enzymes [BR:btf01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     YBT020_22550
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     YBT020_22550
DNA repair and recombination proteins [BR:btf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     YBT020_22550
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27
Other DBs
NCBI-ProteinID: ADY23738
Position
complement(4395559..4396389)
AA seq 276 aa
MPELPEVENVRRTLENLVTGKTIEDVIITYPKIVKRPDDAEIFKEMLKGEMIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPINKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTAEEIERIYEATVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcctgaattaccagaggttgaaaacgtcagacggacacttgaaaatcttgtaacagga
aaaacaattgaagatgtcattattacctatcccaaaatcgtaaaacgtccagatgatgca
gaaatctttaaagagatgctaaaaggcgagatgattgaaaatataaagcgaagaggaaag
tttttgcttttatatgtaacgaattatgtcattgtttcacatttgcgtatggaaggtaag
tttttactgcatcaagaggatgagccaattaataagcatacgcacgtccgtttcttattt
acagatggaacggaattacattataaagatgtgagaaagtttggtacgatgcatctcttt
aaaaaaggtgaggaaatgaatcaaatgcctcttgctgacttaggtccggagccatttgat
gctgaattgacaccacagtatttacaagagagattgcaaaagacaaatcgtaaaataaaa
gttgtattattagaccagcgtcttttagtagggcttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatccagaacgagaagcgtcgtctttaacagcagaagaaatt
gagcggatttatgaggcgactgttacaacgttaggcgaagcagtgaagcgtggcggaagt
acaattcgaacgtatatcaactcacaagggcaaattggctcattccaagaacttctaaat
gtatatggaaaaaaaggagaaccgtgtgtgacttgcggtacgatattagaaaaaacagtt
gttggcggaagaggaacgcattactgcccgatttgtcagcctagaatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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