KEGG   Bacillus thuringiensis Bt407: BTB_c01250
Entry
BTB_c01250        CDS       T02277                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
btg  Bacillus thuringiensis Bt407
Pathway
btg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:btg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BTB_c01250 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:btg03021]
    BTB_c01250 (rpoC)
   03400 DNA repair and recombination proteins [BR:btg03400]
    BTB_c01250 (rpoC)
Enzymes [BR:btg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BTB_c01250 (rpoC)
Transcription machinery [BR:btg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BTB_c01250 (rpoC)
DNA repair and recombination proteins [BR:btg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BTB_c01250 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4 RPOC_hybrid
Other DBs
NCBI-ProteinID: AFV15908
Position
117283..120894
AA seq 1203 aa
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGSTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVGKGLAHNIKSAKRKIERVHPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMVFKDANEAILAYQNGYVHLHTRIAVA
ASSVNNVTFTEEQKGKLLLTTVGKLIFNEILPESFPYINEPTNSNLEKETPAEYFVEKGA
NIKEIIASREEVAPFSKKILGNIIAEVFKRFQITETSRMLDRMKNLGFKYSTKAGITVGV
SDILVLGEKDEILHEAQAKVDNVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKSL
NKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESLY
DRLVGRFARKTVKHPETGEVLVSENQLITEDIAHIVENSGVETVNIRSAFTCNTRHGVCK
KCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVIAAINDVKDRQEVVVQGEVEARTYAIPYGARLKVTPGQPISHG
KELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVS
DAGETDVLPGTLLDIHQFTDANAKVLLKGKQPATARPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTTQDNMNVENDEIY
VEQ
NT seq 3612 nt   +upstreamnt  +downstreamnt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcacctgacaagatt
cgttcttggtcatacggtgaagttaagaaaccagaaactattaactatcgtacgttaaag
cctgaaaaagatggcttgttctgtgagcgtattttcggaccacaaaaggactgggaatgt
cattgcggaaaatacaaacgtgtacgttataaaggtgtagtttgtgatcgatgtggcgtt
gaagtaacgcgtgcaaaagtacgtcgtgaacgtatgggtcatattgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattactttctgaaaaagaataccgtgcatatcgtgat
cgatatggtagcacattccaagctgctatgggtgcagaagcgattaaaaagctactacaa
gacattgatttagataaagaagtagacttcttaaaagaagaattaaaaacagcacaagga
caacgccgtactcgtgctattaaacgtctagaagtattagaagcattccgtaactctgga
aatgaaccatcttggatgatcttagatgttctaccagttatcccaccagaactacgccca
atggtacagttagatggtggacgttttgctacttctgacttaaacgacttatatcgtcgt
gtaattaaccgtaacaaccgtttaaaacgtctattggacctaggtgctccaagcatcatc
gttcaaaacgaaaaacgtatgttacaagaagctgtagatgcattaattgataatggtcgt
cgtggccgtccagtaactggaccaggtaaccgtccattaaaatcattatctcacatgctt
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactactctggc
cgttctgtaatcgttgtaggaccgaacttaaagatgtaccaatgtggattaccgaaagaa
atggcgcttgaactgttcaaaccttttgttatgaaagagttagttggaaaagggttagca
cacaacattaagagtgcgaaacgtaaaattgagcgtgtacaccctgaagtttgggacgtt
ttagaatctgtgattaaagaacatccagtacttctaaaccgcgcaccaacacttcaccgt
cttggtatccaggcgtttgaacctacattagtagaaggtcgcgcaattcgtcttcaccca
cttgtatgtactgcatacaacgcggactttgacggtgaccaaatggcggttcacgttccg
ttatcatcagaggcacaagcagaagctcgtattcttatgttagcggcacaaaacatcttg
aatccaaaagacggaaaaccagttgttactccatctcaggatatggtattaggtaactac
tacttaacacttgagcgtgaaggcgcaatcggtgaaggtatggtcttcaaagatgcaaac
gaagcaatacttgcatatcaaaatggatatgtacatctgcacacacgtattgcagttgct
gcaagttcagtaaataacgtaacgtttactgaagagcaaaaaggtaagcttctattaaca
acagttggtaaattaatatttaacgaaatcttaccagagtcgttcccttatattaatgaa
ccgacaaactcaaaccttgaaaaagaaacaccagcggaatatttcgttgaaaaaggtgcg
aacattaaagaaattattgctagtcgcgaagaagtggcgccatttagcaagaagatcctt
ggtaacatcattgcggaagtgttcaaacgtttccaaattacagaaacgtctcgcatgctt
gaccgtatgaaaaacttagggttcaagtactctacaaaagctggtattacagttggggta
tctgacattcttgtattaggcgaaaaagatgaaattctccacgaagcacaagcaaaagta
gataatgtaattaaacaattccgtcgcggtttaatcacggaagaagaacgttacgatcgc
gttatctctatttggagtaatgcaaaagatgttatccaaggaaaactgatgaaatccttg
aataaacgcaatccaatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtctgatggccaatccatctggtcgtatcatcgaa
cttccaatcaaatcgagtttccgtgaaggtttaacagtacttgagtacttcatctctacg
catggtgcgcgtaaaggtcttgccgatacagcacttaaaactgccgattctggttactta
acacgtcgtcttgtagacgttgcacaagatgtaattgtccgtgaagatgattgtggaaca
gatcgtggtctattaattggtgcgattaaagagggtaatgaagtaattgagtcattatat
gatcgtcttgttggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaagta
ttagttagtgaaaaccaattaattactgaagatatcgctcatatcgttgaaaattcgggt
gttgaaactgtaaatattcgttcagcgtttacgtgtaacactcgccatggtgtatgtaag
aagtgttacggtcgtaacttagcaactggtacagacgtagaagtaggagaagcggtaggt
attatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacattccat
acaggtggggttgccggagatgatatcactcaaggtttacctcgtatccaagagatcttc
gaagctcgtaatccgaaaggtcaggcagttatcagtgaaatcgacggtgttatcgcagcg
atcaacgatgttaaagatcgccaagaagtagttgtacagggtgaagttgaagctcgtacg
tatgctattccttacggtgctcgtctgaaagtaactccaggacagccaattagccacggt
aaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacattaca
gcagttcaagaatacttattacgtgaagttcaaaaagtataccgtatgcaaggggtagaa
attggtgacaaacacgtagaggtaatggtacgtcaaatgctacgtaaagttcgtgtaagt
gatgcaggtgaaacagacgtattaccaggaacattactagatatccatcagtttactgat
gcgaatgcgaaggtgttactgaaaggtaaacaaccagcgacagctagacctgttctactt
ggtattacaaaagcttcacttgaaactgattcattcttatctgcagcatcattccaagaa
acaactcgtgtcttaactgatgcagcaattaaaggtaaacgtgatgagcttctaggattg
aaagagaacgttattatcggtaaacttgttcctgctggaacaggtatgaatcgttatcgc
aaagtggatcttgtaaaaacaacacaagataacatgaatgtagaaaacgatgagatttat
gtggaacagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system