KEGG   Burkholderia thailandensis E254: BTN_779
Entry
BTN_779           CDS       T03380                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
bthe  Burkholderia thailandensis E254
Pathway
bthe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bthe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BTN_779 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bthe03019]
    BTN_779 (recQ)
   03400 DNA repair and recombination proteins [BR:bthe03400]
    BTN_779 (recQ)
Enzymes [BR:bthe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BTN_779 (recQ)
Messenger RNA biogenesis [BR:bthe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BTN_779 (recQ)
DNA repair and recombination proteins [BR:bthe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BTN_779 (recQ)
SSDB
Motif
Pfam: RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII HHH_5
Other DBs
NCBI-ProteinID: AIT22161
Position
1:complement(841889..843736)
AA seq 615 aa
MSRALEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRSESGR
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEIRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSGPCGNCDTCLEPPATWDATREAQMA
LSCVFRAQRASGFNFGASHLIEVLRGGRTEKVLQRGHESLSTFGIGAELSEAEWRAIFRQ
LVAFGYLAVDHGGFGALVLTEASKPVLKGEEKVTLRRYVKPARTRQSSGRSGARVDPTAG
MSARERACWERLRAWRAETAKSDGVPAYVIFHDATLAEIARNAPESIDDLRHIPGIGARK
LDRFGDEILEVVEAA
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtcccgcgcgctcgaaattctcaacgaagtcttcggctatcccgccttccgaggtcaa
cagggcgagatcgtcgagcacgttgcggcgggcggcgactgcctcgtgctgatgcccacg
ggcggcggcaagtcgctctgctaccagatcccggcgctcgtgcgcagcgagtcgggccgc
ggcgcgggcatcgtcgtgtcgccgctcatcgcgctgatgcaggatcaggtcgccgcgctg
tccgaagtcggcgtgcgcgcggcgtatctgaactcgacgctgtcgggcgccgaggcggcc
gcgaccgaacgcgcgctgcgcgacggcgacatcgatctgctctacgtcgcgcccgagcga
ttgatgacgccgcgttttctcgatctgctcgagcgcgcgcgcatcggccttttcgcgata
gacgaggcgcactgcgtgtcgcagtggggtcacgatttccggcccgagtacattcagttg
tcggtgctgcacgagcgctttccggacgtgccgcgaatcgcgctgaccgcgaccgccgac
gcgatcacgcgcgacgagatcgttcagcggctcgcgctcgacgacgcgcgcatcttcgtg
tcgagcttcgaccggccgaacatccgctatcggatcgtcgaaaaggacaacgcgcgctcg
caattgctcgatttcattcgcgcggagcacacgaacgcggacggcacgaccgatgcgggc
gtcgtctattgtctgtcgcgccgcaaggtcgaggagacggccgagtggttgaaggcgcag
ggggtgcgtgcgctgccgtatcacgcgggaatggagttcgaaatccggcagaagcaccag
gagatgttccagcgcgaggaggggatcgtgatgtgcgcgacgatcgcgttcggcatgggc
atcgacaagccggatgtgcgcttcgtcgcgcacctggatttgccgaaaagcgtcgaaggc
tactaccaggagaccgggcgcgcgggccgcgacggcatgccggcgaatgcgtggatggcg
tatgggctcggcgatgtcgttcagcagcgcaagatgattgacgaatcggatgccgacgac
acgcacaagcgcgttcagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggca
tcgtgccgccgggtgcgcctccttgcgtacttcggcgagacgagcggcccgtgcggcaat
tgcgacacctgcctcgagccgccggcgacatgggacgcgacgcgtgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaatttcggcgcgagccacctg
atcgaagtgctgcgtggcgggcgtaccgaaaaggtgctgcagcgcggtcacgagagtctc
agcacgttcggcatcggcgccgaactgtccgaagccgaatggcgggcgatcttccggcag
ctcgtcgcgttcggttatctcgccgtcgatcacggcggcttcggcgcactcgtgctgacg
gaagcgagcaagccggtgctcaagggcgaggagaaggtcacgctgcgccgctacgtgaag
ccggcgcgcacccggcaatcgtccggccgcagcggcgcgcgcgtcgatccgacggccggc
atgagcgcgcgcgagcgcgcgtgctgggagcgcttgcgcgcatggcgcgcggaaacggcg
aagagcgacggcgtgcccgcgtacgtgatcttccatgacgcgacgctcgcggagatcgcc
cgcaacgcgccggaatcgatcgacgacttgcgccatatccccggaatcggcgcgcgcaag
ctggaccgcttcggcgacgagattctcgaggtcgtcgaggcggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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