KEGG   Bacillus thuringiensis YBT-1518: YBT1518_32537
Entry
YBT1518_32537     CDS       T02930                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bthu  Bacillus thuringiensis YBT-1518
Pathway
bthu02024  Quorum sensing
bthu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bthu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YBT1518_32537
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YBT1518_32537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bthu03019]
    YBT1518_32537
   03036 Chromosome and associated proteins [BR:bthu03036]
    YBT1518_32537
Messenger RNA biogenesis [BR:bthu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     YBT1518_32537
Chromosome and associated proteins [BR:bthu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    YBT1518_32537
SSDB
Motif
Pfam: Hfq Spore_SspJ LSM
Other DBs
NCBI-ProteinID: AHA75541
UniProt: A0A9W3KM35
Position
pBMB0232:9299..9532
AA seq 77 aa
MERKSQLLQEKRTKDMVSFQEQVLQEAVQRKKNMTMILINGFHIKGTITGYDLYSILLEV
EGKQQLVYKHAISTIRL
NT seq 234 nt   +upstreamnt  +downstreamnt
ttggaaagaaaatcacaattactacaagagaaaagaacaaaagatatggtatcctttcag
gaacaagtactacaagaagcagtacaaagaaaaaagaacatgacaatgattttgataaat
ggatttcatatcaaaggaacgataacagggtatgatttatattcgattttgttagaagtg
gaagggaaacaacaactcgtgtataaacatgctatttcgacaatccgattataa

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