KEGG   Burkholderia thailandensis E444: BTJ_2935
Entry
BTJ_2935          CDS       T03112                                 
Name
(GenBank) RNB domain protein
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
btj  Burkholderia thailandensis E444
Brite
KEGG Orthology (KO) [BR:btj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:btj03016]
    BTJ_2935
Enzymes [BR:btj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BTJ_2935
Transfer RNA biogenesis [BR:btj03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BTJ_2935
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: AHI77290
Position
1:3303694..3305766
AA seq 690 aa
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQQADEA
AQQIDLDFLWECAPAEEFAYATLADEYFGASYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALAALERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTRPDKNSIEYKA
LDAAALARGVSPARLLLDCGGIPSARALHEARFLAEYFPHGTGFPPVTVGKLPDDLPRAD
VDAFSIDDVTTTEIDDAFSVEHLSDGRVRIGVHIAAPALGVVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGGYRPALSLYIIVKRDTQEIVANETRAEFVYVKSNLRHNT
LDGLVTEDALAAGTGDYPHKDDIAVLWPLAQALFERRQVARAGYGLKREVQRNTDYNFYV
EGERVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDDVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLLSVLDAPTVSGGEPSDDEEDAGAADDVLLDAAD
ESAESEAEALAEASGGGNGESPANGEEQSK
NT seq 2073 nt   +upstreamnt  +downstreamnt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggat
gtgctgatcgaattcgagaagcccgccgcgggcgaactgatgcagcaggcggatgaagcc
gcccagcagatcgatctggactttctgtgggagtgcgcgcccgctgaggaattcgcgtat
gcaacgctcgccgacgagtatttcggcgcgagctacggccccgtcgagcgcgcggcgctc
gtgctgcgcctgcacggcgcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaggagcagctgaaaatggcgctcgccgcgctcgagcgcaagcgccagcag
gcgctcgtgcaggccggctacgaagaggaactgaaggcgggcaggctgcccgacgcgttc
gcgggcaaggcgctcggcctgctgacgaggccggacaagaactcgatcgaatacaaggcg
ctcgatgcggcggcgctcgcgcgcggcgtgtcgcccgcgcgtctcctgctcgactgcggc
ggcattccgtcggcgcgcgcgttgcatgaggcgcgctttctcgccgagtacttcccgcac
ggcacgggctttccgcccgtcacggtcggcaagctgcccgacgacctgccgcgcgcggac
gtcgacgcgttctcgatcgacgacgtcacgacgaccgagatcgacgacgcgttctccgtc
gagcatctgtccgatgggcgcgtgcgcatcggcgtgcacatcgcggcgcccgcgctcggc
gtcgtgcgcggcgacgcggtggatgcgatcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggtgacaagatcacgatgctgccggacgacgtggtcgacgtgttcacgctgaaggag
ggcggctaccgcccggcgctgtcgctgtacatcatcgtgaagcgcgacacgcaggagatc
gtcgcgaacgagacgcgggccgaattcgtctatgtgaagagcaacctgcggcacaacacg
ctcgacgggctcgtcacggaagacgcgctcgcggcgggcacgggcgactatccgcacaag
gacgatatcgcggtgctctggccgctcgcgcaggcgctcttcgagcggcgccaggtcgcg
cgcgcgggctacgggctcaaacgcgaagtgcagcgcaataccgattacaacttctatgtc
gaaggcgagcgcgtgtcgatcacgccgcgccggcgcgggtcgccgctcgatctgatcgtg
tcggaactcgcgattctcgcgaactcgacgtggggcgcgttcctgcacgatcacagcgtg
cccggcatctatcgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgg
atgcagacgagcgctgcgccgcacgaggggctcggcgtgccgcagtatgcgtggagcacg
tcgccgctgcgccgttacgtcgacctcgtcaatcagtggcaactgctcgcgtgcgtgcag
cacggcgtgaccgcgaagctcgccgcgccgttcaagcagaaggacgcggatctgtacgcg
gtcgtgcagggtttcgacgacacgtacgccgcatacgccgaccaccagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggcgagctcgtgcgcctcgacgacgtgccgctgctgctgcacgtgcccgcgctc
ggcgtgcatgcgcgcggcacgcgggtgctgctcgatgtgatgtcggtcgacgaattgacg
atcgaggcgtcggtgcggcttctcagcgtgctcgatgcgccgacggtgtcgggcggcgag
ccgtcggacgatgaagaggacgccggcgcggccgacgacgtgctgctcgacgccgccgac
gaatcggcggaaagcgaagcggaagcgctcgccgaggcgagcggcggcggcaatggcgaa
tcgccggcgaacggcgaggaacagtcgaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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