KEGG   Bacillus thuringiensis MC28: MC28_2967
Entry
MC28_2967         CDS       T02263                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
btm  Bacillus thuringiensis MC28
Pathway
btm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MC28_2967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btm03019]
    MC28_2967
Messenger RNA biogenesis [BR:btm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MC28_2967
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 PDEase_II
Other DBs
NCBI-ProteinID: AFU14389
Position
complement(2922794..2924464)
AA seq 556 aa
MKRKENESVKVFALGGVGEIGKNMYCVEIDSEIFIVDAGLMFPGDEMFGIDIVIPDITYL
VENQERVKGLFITHGHEDHIGGIVYVLRKLSIPVYATKLTVGLIQEKLGEAGMLGRVDLK
TIDSNSTVEFNTTTVSFFGTTHSIPDSVGVCFHTSKGAVVYTGDFKFDQTPIGNNGADLG
KMAQIGNEGVLCLLSDSTNAERPGYTGSEKEVGVEISKVFYGAEGRIIVASFASNVHRIQ
QVFDAAAETGRKVAVVGRSMVKVVDIARRLGYLDVPEGMVISLQEVDNFPEKKVAILTTG
SQGEPMAALSRMAKQAHKQISIRKGDTVIIAASPIPGNEISVSKIIDLLFRAGAEVIYYG
ERKVHVSGHGSQEELKLMLNLMKPKYFVPVHGEFRMQKAHAYLAEDVGITRENIFIVEKG
DVIAFGDNEANLVGKVQAGNVLIDGLGVGDVGNIVLRDRKMLSQDGILVVVVTLGKDEKK
IISGPEIISRGFVYVRESEALIERSTEIVRMIVEQSIKEYSIEWSMLKQNIRELLGQFLY
EETKRKPMILPIIMEV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaagagaaaagagaatgagtctgttaaagtatttgctcttggtggagtaggtgaaatc
gggaaaaacatgtactgtgttgaaattgattctgaaatctttattgtagatgcaggatta
atgttcccaggagatgaaatgtttgggattgatatcgttattcctgatattacatactta
gtggaaaatcaagagcgagtaaaaggtttatttattactcacggtcatgaagatcatatt
ggtggaattgtttatgtacttcgtaaattatctattccagtgtatgcaacgaagttaacg
gtaggacttatacaagaaaaacttggtgaagcgggcatgttaggccgtgtggacttaaaa
acaatcgattcaaattcaacagtagagtttaatactacaacagtgtcattctttggaacg
acacatagtattccggattctgttggtgtttgtttccatacatcaaaaggtgctgtagtg
tatacaggagactttaaatttgatcaaactccaattggaaataatggagcagatcttggg
aaaatggcacaaatcggaaatgaaggcgtactttgcttattatctgatagtacaaacgct
gagcgtccaggctatacaggttcggaaaaagaagttggtgtagaaatttctaaagtgttc
tacggtgcagaaggtcgtattatcgttgcttcatttgcatcgaacgtacatcgtattcaa
caagtatttgacgcggctgccgaaacaggaagaaaagtagcggtagtaggacgtagtatg
gtgaaagtagtagacattgcaagacgtcttggttatttagatgttccagaaggtatggtt
atttcattacaagaagtagacaacttcccagagaaaaaggtagctattttaacgacaggt
agtcaaggggaaccgatggcagcactttctagaatggcgaagcaagctcataaacaaatt
tcaattcgtaaaggtgatactgttattattgcagcttctccaattccggggaatgaaata
tctgtatcgaaaattattgatttgttatttagagctggagctgaagttatttattacggt
gaaagaaaagttcacgtttcaggtcatggtagtcaagaagaattaaaactaatgttaaat
ttaatgaaacctaagtattttgtacccgtacatggtgagtttcgtatgcaaaaagcacat
gcatatttagctgaagatgtaggtattacaagagaaaatatttttatcgtagaaaaaggc
gatgtaattgcttttggtgataatgaagccaacttagttggtaaagtgcaagctggtaat
gtcttaattgatggattaggtgtaggtgacgttggtaatatcgttcttcgagatagaaag
atgttatctcaagatggaatattagtagttgttgtaacacttggtaaagatgaaaagaaa
attatctctggtccagaaatcatttcacgtggttttgtatatgttcgtgaatcagaagca
ttaattgagcgatctacagagattgtacgcatgattgttgagcaatcaattaaagaatat
tcaattgaatggtctatgttaaaacaaaatattcgtgaattattagggcagttcttgtac
gaagagacaaagagaaaacctatgattttaccgattattatggaagtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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