KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_13660
Entry
F544_13660        CDS       T03019                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
btra  Bibersteinia trehalosi USDA-ARS-USMARC-190
Pathway
btra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:btra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F544_13660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:btra03019]
    F544_13660
   03016 Transfer RNA biogenesis [BR:btra03016]
    F544_13660
Enzymes [BR:btra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     F544_13660
Messenger RNA biogenesis [BR:btra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     F544_13660
Transfer RNA biogenesis [BR:btra03016]
 Prokaryotic type
  tRNA degradation factors
   F544_13660
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 aRib S1_2 SLS1_KH2 UPF0181
Other DBs
NCBI-ProteinID: AHG86594
UniProt: W0R622
Position
complement(1501601..1503739)
AA seq 712 aa
MLNPIVRQFKYGQHTVTLETGAIGRQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLT
VDYQERTYAAGRIPGGFFKREGRPSEGETLVARLIDRPVRPLFPEGFFNEIQVIATVMSV
NPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQLVLNPTTSEQKISRLDLVVA
GTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENIKEFVKEAGKPRWDWVAPEPNT
DLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAETIAAIIGEDETISEGAIVDIFTAL
ESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSALFTRGETQALAVATLGTER
DAQIIDELTGEKSDRFLFHYNFPPFSVGETGRIGSPKRREIGHGRLAKRGVLAVMPTAEE
FPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMRIALNQAKGARMHILGVMEQA
IPAPRADISDYAPRIHTMKIDPKKIKDVIGKGGATIRALTEETNTSIDIDDDGTVKIAAT
DGNAAKAVMARIEEIVAEVEVNQIYNGKVTRVVDFGAFVSILGGKEGLVHISQITDTRVE
RVSDYLSVGQEVQVKVVEIDRQGRIRLTMKDLNAAAETETVEQENSQSDIVE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgcttaatcctattgtaagacaatttaaatacggtcagcataccgtaaccttggaaacg
ggggctattggtcgtcaagcaactgctgccgtcatggcaagtatggacgacaccacggtt
ttcgtgactgtggttgcgaaaaaagacgtaaaagaaggtcaagatttctttcctttaacg
gttgattatcaagaacgtacctatgcagcaggtcgtatccctggtggtttctttaaacgt
gaaggcagaccatcagaaggtgaaaccttagttgctcgtttgattgaccgtcctgttcgc
ccacttttccctgaaggtttctttaacgaaatccaagtcattgcaaccgtaatgtcagtg
aatccacaaattagcccagatttagtggcaatgatcggtgcatcggcagcgctttcttta
tcaggtgtaccatttaatggcccaatcggtgcagctcgtgttggttttattaacgatcaa
ttagtattaaacccaacgactagcgaacaaaaaatcagccgcttagatttagtggttgca
ggtacagataaagccgtattgatggtggaatcagaagcagatattttaactgaagaacaa
atgcttgcagcggtggtgtttggtcatgaacagcaacaagtggtaattgaaaatatcaaa
gagtttgttaaagaagcaggcaaaccacgttgggattgggttgcaccagaaccaaatacc
gatttaattaataaagtgaaagcattagctgaaactcgtttaggtgatgcgtaccgtatc
gttgaaaagcaagtgcgttatgaacaaattgatgcaattaaagcagaaacaattgcagca
atcattggcgaagatgaaaccatttcagaaggcgctatcgttgatattttcacggcatta
gaaagccaaatcgtgcgtagccgtattattgcgggcgaaccacgcattgacggtcgtact
gttgataccgtgcgtgccttagatatttgcactggcgtattaccacgcacccacggttct
gcgcttttcactcgtggtgaaacccaagcattagcagtagcaacattgggtacagagcgt
gatgcacaaatcattgatgaattaaccggcgaaaaatctgaccgtttcttattccactat
aacttccctccattctcagtcggtgaaaccggccgtatcggctcaccaaaacgccgtgaa
attggtcatggtcgtttagcaaaacgtggtgtgttagcggtgatgccaactgcggaagag
ttcccgtatgtagtgcgagtggtgtctgaaatcaccgaatctaacggttcttcttcaatg
gcatctgtatgtggtgcttctcttgcgttaatggatgcaggtgtgccaatcaaagcggcg
gttgctggtatcgcaatgggactcgtgaaagaagacgagaaattcgtagtactttccgat
attttaggtgatgaagaccatttaggcgatatggactttaaagttgcgggaactcgcact
ggtgtaacagcactgcaaatggatattaaaattgaagggatcacccctgaaattatgcgt
attgctttaaaccaagcgaaaggtgcaagaatgcacattttaggtgtgatggaacaagca
attccggcacctcgtgcagatatttctgactatgcgccacgcattcacaccatgaagatc
gatccgaagaaaatcaaagatgtgattggtaaaggcggtgcaacaattcgtgctttaacc
gaagagaccaatacttcaatcgatattgatgatgacggtaccgtgaaaattgcggcaact
gacggtaatgcagcgaaagcggtaatggctcgcattgaagagatcgttgccgaagtggaa
gtaaaccaaatctataacggtaaagtaacccgtgtggtggacttcggtgcattcgtttca
attttaggtggcaaagaaggcttggtacacatttcgcaaatcacagatactcgtgtagaa
cgtgtgtctgattacctcagtgtcggtcaagaggtgcaagtgaaagtggtggaaattgac
cgtcaaggcagaatccgtttaacgatgaaagatttaaatgccgcagcagaaacagaaact
gttgagcaagaaaattctcaatcagatatcgttgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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