KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-190: F544_4440
Entry
F544_4440         CDS       T03019                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
btra  Bibersteinia trehalosi USDA-ARS-USMARC-190
Brite
KEGG Orthology (KO) [BR:btra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:btra03009]
    F544_4440
Enzymes [BR:btra01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     F544_4440
Ribosome biogenesis [BR:btra03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    F544_4440
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 TRAM Cons_hypoth95 PCMT Methyltransf_11 MTS RrnaAD Methyltransf_12 Methyltransf_4 Methyltr_RsmB-F Methyltransf_15 Ubie_methyltran Met_10 Ribosomal_L22 Methyltransf_23 DOT1 Methyltransf_32
Other DBs
NCBI-ProteinID: AHG85676
UniProt: W0R4J6
Position
complement(458750..460066)
AA seq 438 aa
MALFYSDKLAKKSPKTTACPVFQIQNLDYQGLGVAKLNGKTWFIENALPNERVRAKVLEE
KRQYGRAQAVEILQKSAKRQSPFCPVYSQCGGCQMQHIPLEMQRQTKQNSLFQRLQKLQA
EAIDFQPMIVGNGEGYRRRARLSIALQKNQLAIGFRQAGSQDIIHINQCQVLEPELSALL
PKIQILLQQWENKKQLGHLELVQADNGIALLLRHIGAIAPRDQQKLRDFAEHHQLMLFVM
YEQDLIEQWRGEAPYYEIQGLKLHFSIRDFIQVNRELNPKMVETAINWLDLSGSERVLDL
FCGMGNFTLPIAQQAQQVVGVEGVEAMVLQARQNAQTSGLKNAEFYQTNLDQPFIEQAWA
KEAFDKVLLDPARHGALFCLDHLCDLNPSRIVYVSCNPATLVRDAQKLIEQGYHIVKSAM
IDMFPHTGHLESVTLFAR
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcactgttttattccgacaaattggcaaaaaaatcgcccaaaaccaccgcttgccca
gtatttcaaattcaaaatttagattatcaaggcttaggtgttgccaaactaaatggcaaa
acgtggtttattgaaaatgcgctaccaaatgagcgcgtaagagccaaagtattagaagaa
aaacgccagtatggccgcgcacaagcggtcgaaattttgcaaaaatctgcaaaacgccaa
tcccctttctgcccagtttattcgcagtgtggcggttgtcaaatgcagcatattccattg
gagatgcaacgccaaacaaaacaaaactcactgtttcagcgtctgcaaaaattacaagct
gaagccattgactttcagcccatgattgttggcaatggcgaaggttatcgccggcgcgca
agattaagcattgctttacaaaaaaatcaactggctattggctttcgccaagctggctca
caagatattatccacatcaaccaatgccaagtgttagagcccgagctttcagctttactg
ccgaagatccaaatactgctacagcaatgggaaaataaaaaacaacttgggcacttagag
cttgtgcaagcggataatggcattgctctgttattacgccacattggtgcaattgcacct
cgtgatcagcaaaaactaagagattttgccgaacatcatcaattaatgctatttgtcatg
tatgaacaagatctgattgaacagtggcggggtgaagctccttattacgaaattcaaggc
ttaaagctgcatttttcgattcgagattttattcaagttaatcgtgaattaaaccctaaa
atggtcgaaacagcgataaattggcttgatttgtcaggatcagaacgcgttttggatctc
ttttgtggaatggggaattttaccttaccaattgctcaacaagctcagcaagtagttggt
gtagaaggcgttgaggcaatggtacttcaggctcgccaaaatgcccagacaagcgggtta
aaaaatgcagaattctaccaaactaatctcgaccagccttttattgaacaagcgtgggca
aaagaggcatttgataaagtgctgcttgatcccgctcgtcatggtgcattattctgctta
gatcatctgtgcgatctcaaccccagccgcatcgtttatgtttcttgtaatcccgcaact
ttggttcgcgatgcccagaaactgattgaacaaggctatcacattgtaaaatcagcgatg
attgatatgttccctcatactgggcatttagaaagtgttacactttttgctcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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