KEGG   Bibersteinia trehalosi USDA-ARS-USMARC-188: F542_10860
Entry
F542_10860        CDS       T03017                                 
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
btre  Bibersteinia trehalosi USDA-ARS-USMARC-188
Brite
KEGG Orthology (KO) [BR:btre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:btre03016]
    F542_10860
Enzymes [BR:btre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     F542_10860
Transfer RNA biogenesis [BR:btre03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    F542_10860
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC
Other DBs
NCBI-ProteinID: AHG81804
UniProt: A0A4V7I9V0
Position
1154390..1155520
AA seq 376 aa
MHPIPYQWIETDQQLAEICHNARMQPVVTLDTEFIRIRTYYAKLGLIQLFDGNHVALIDP
LAINDFTPFVQLLADTKVLKVLHACSEDLEVFHHYFQQMPVPMLDTQIMAGFAGLGTSVG
FAKLVQHYLNTELDKGASRTDWLARPLSEKQLQYAAADVWYLLPIYHQLATALAQTPWEN
AVQEECRSVCTKVSLPVDLDKAYKDISNAWQLNAQQLSVLHLLAKWRIEEAIKRDLALNF
IVKEQSLWRIAKEQPKHTSALLEFMHPNEVRIHGKKLLRIVEQSKHLAQEDYPDEIMRIV
DFVGYKPSLQALQRRLSEILPENLPIELLASKRQLNQLFGWQRKGENTEKLPELLIGWRR
AFGLQLLETLRKIVVN
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcatcctataccatatcaatggattgaaacggatcaacaacttgctgaaatttgtcat
aacgcacgcatgcagccggttgtgactctagatacagaattcattcgtattcgtacttat
tatgcaaaattagggcttattcagcttttcgatggaaatcatgttgcgcttattgacccg
ctagcaattaatgatttcacgccatttgttcagctacttgctgacacaaaagtcttaaaa
gtacttcatgcttgtagtgaagatcttgaggtttttcaccattattttcagcaaatgcct
gtgccaatgctagatacgcaaataatggctgggtttgcaggcctcgggacgtcagtagga
tttgctaaattagtgcaacattatctaaatactgaattagataaaggcgcctctcgtacg
gattggttggctcgaccattaagcgagaaacaacttcagtatgcagctgcagatgtttgg
tatttattgcccatttatcatcaactcgcaacagcgcttgcacaaaccccttgggaaaat
gcggttcaagaagaatgccgtagtgtttgtactaaagtgagtctgccggtagatttggat
aaagcctataaggatattagcaatgcttggcaactcaatgctcagcaactctcagtgtta
cacttattagcaaaatggcgtattgaagaggcaattaagcgagatttagctctcaatttt
attgtgaaagaacagagtttatggcgtatagccaaagagcaaccaaaacatacatcggca
ttactggaatttatgcatccaaatgaagtgcgaattcacggcaagaagctattacgcatt
gttgagcaaagtaaacatttagcacaagaagattatcctgatgaaattatgcgcattgtg
gattttgttggatataaaccgagtctccaggcgctacaacgtcgcttatccgaaattttg
cctgaaaatttaccgatagaattacttgccagcaaacgacaattgaatcaactttttggc
tggcaacggaaaggagaaaatacagaaaaattaccggaattattaattggttggcggcga
gcatttggactacaattgttagaaacattgagaaagattgttgttaattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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