KEGG T03018: F543

Bibersteinia trehalosi USDA-ARS-USMARC-189: F543_440

Entry

F543_440          CDS       T03018

Name

(GenBank) Ribosomal protein S12 methylthiotransferase RimO

K14441

ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]

Organism

btrh Bibersteinia trehalosi USDA-ARS-USMARC-189

Brite

KEGG Orthology (KO) [BR:btrh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:btrh03009]
    F543_440
Enzymes [BR:btrh01000]
2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     F543_440
Ribosome biogenesis [BR:btrh03009]
Prokaryotic type
  ribosomal protein modification factors
   F543_440

SSDB

Motif

Pfam:

Radical_SAM TRAM_2 UPF0004 CLP1_P TRAM ACP_syn_III Methyltransf_2

Other DBs

NCBI-ProteinID:

AHG82908

Position

42396..43727

AA seq 443 aa
MSSAPNIGFVSLGCPKNLVDSERILTELRSDGYNIIPTYEGADLVIVNTCGFIDSAVQES
LESIGEALENNGKVIVTGCLGAKENQIREVHPQVLEITGPHSYEAVMQHVHKYVPKPEYN
PYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLDSRSIVQVLDEAKRLVD
AGVKEILVVSQDTSAYALDKKKENSAKTVFWNGMPIKNDLGTLCEKLGSLGVWVRLHYVY
PYPHVDDLIPLMAEGKILPYLDIPLQHASPKILKAMKRPGSIERTLERIKKWREICPELT
LRSTFIVGFPGETEEDFQMLLDFLKEAQLDRVGCFKFSPVDGAVATDMPDQVPEEVKEAR
FHRFMALQQEISAARLQAKVGKTLQVIVDEIDEEGIIGRSQADAPEIDGVVYVDNLSGTD
VAVGQIISVKITNADEYDLWGTC

NT seq 1332 nt +upstreamnt +downstreamnt
atgagttcagcaccgaatatcggctttgtgagccttggttgcccgaaaaatttagtggac
tccgaacgaattttaacggaattgcgctcggatggttataacattatccccacctatgaa
ggcgcggatttagtcattgtaaatacttgtggttttattgatagcgcagtacaagaatca
ctggaaagtataggtgaagctttagaaaataacggcaaagttattgtaacaggttgtttg
ggagcaaaagagaaccaaattcgtgaggttcatccacaggtgttggaaatcacaggccca
cacagctacgaagctgtcatgcagcacgtacataaatatgtgccaaaaccagaatataac
ccttacactagtcttgtgccgaaacaaggcattaaactcacaccgaaacactatgcttat
ctgaaaatttcagagggctgtgatcatcgttgtaccttctgtattatcccatcaatgcgt
ggcgacttagatagtcgttctatcgtgcaagtgttagatgaggcgaaacgccttgttgat
gcaggcgtaaaagaaattttggtggtttcacaagacacatcagcttatgccttggataag
aagaaagaaaattctgccaaaaccgtattttggaacggtatgccaattaaaaacgatttg
gggacgttatgtgaaaagctcggctctcttggcgtttgggtacgtttgcattatgtttat
ccttatccgcatgtagatgatttaattcctcttatggcagaagggaaaattctgccgtat
ttagatattccattgcaacacgctagtccaaaaattcttaaagcaatgaaacgcccaggg
agtatagagcgtacattagaacgtattaaaaagtggcgtgagatttgtcctgaattgacg
ttgcgttctactttcattgttggttttcctggggaaacagaggaagatttccaaatgttg
ttggatttcttaaaagaagcgcagcttgatcgtgtgggctgttttaaatttagtccagta
gatggtgcagtggcaacggatatgccggatcaagtgccagaagaggtgaaggaagctcgt
ttccatcgttttatggcgttgcaacaagagatttcagctgctcgcctgcaagccaaagtg
ggaaaaaccttgcaagtcattgtggatgaaattgatgaagaaggcattattgggcgctcg
caagctgatgcaccagaaattgatggtgtcgtatatgtagataatctctcaggaacagat
gttgcggtcggtcagattatttcggtcaaaattaccaatgcagatgaatatgatctgtgg
ggaacctgttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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