KEGG   Kyrpidia tusciae: Btus_1536
Entry
Btus_1536         CDS       T01220                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
bts  Kyrpidia tusciae
Pathway
bts03030  DNA replication
bts03430  Mismatch repair
bts03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bts00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Btus_1536
   03430 Mismatch repair
    Btus_1536
   03440 Homologous recombination
    Btus_1536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bts03032]
    Btus_1536
   03400 DNA repair and recombination proteins [BR:bts03400]
    Btus_1536
Enzymes [BR:bts01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Btus_1536
DNA replication proteins [BR:bts03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Btus_1536
DNA repair and recombination proteins [BR:bts03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Btus_1536
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 DEDDh_C tRNA_anti-codon HHH_3 DNA_pol_A_exo1 RNase_H_2 DNA_pol3_a_NII T2SSK GIDA_C
Other DBs
NCBI-ProteinID: ADG06248
UniProt: D5WPI9
Position
1544253..1548539
AA seq 1428 aa
MTRAVSSYSADAPRPWVARILQLRPELTSYMGQIDVVRIAVSPESLSGRVYVSLSHPLPP
DMWANLEDTLTNLAASCGGWRVEVWAEVADRKGAEEAVEAYFPVCARDTGCAEGLFGQIR
GLYAGEGLLRLVAPHEMVSAAARHRGLGQAVQAWYRRVLGISINVQWDVEAGESFQELRE
QCLEEERAMVAELVSAPEKEGPSPASGKEDPVLLGKFVSDDPVPLRSITEEVRSVVAEGT
VFFIETRELSSGRILYHFYLTDRTDSISVKAFAKPDQRQAGLDGLSKGDWVRVRGSVSYD
TFAKELVLMAQDVMRVPPRVRKDQSGAKRVELHVHTPMSALDGVSSPGDLVRRAAEWGHS
ALAVTDHGVAQAFPDFFREAQKAGIKPILGIEAYLVDDGSSVVFGADHRPLEDAEFVVFD
TETTGLNAREHTLIEIAAVKVRGGELVDHYTSLIDPGVPISPKIQELTGITSDMVKGQPG
LSEVLEAFRKFAAGAVLVAHNAEFDMGFLQSAARKLGQPPWDHPVLDTLALARVLYPRER
NHRLKTLTQKFNVELVNHHRAAADAEATAKVFLHLLREAEARGAHHLDECNALGEGIDVS
HARPYHATILVKNPTGLKNLYRLVSLAHTRYLHRQPRIPRTEWLNYREGLMMGTGCLRGE
LFQALLRGRSDEELLDIIQRYDFVEIQPLDQYRPLLRNEEIRDLEAVAEYHRRILELADR
AGRPVVATGDVHYLDPEDRIYRDILQAGSNMEVDDPDAGYHFRTTEEMLAAFGHLGPRAV
EVVVENANRIAEEIEVVKPIPDELYTPVIDGAEEQIRSLAYEKARRLYGDPLPELVKARL
EKELNSIINHGYAVIYLIAHKLVTQSLKDGYLVGSRGSVGSSLVATMTDITEVNPLPPHY
LCPACHYSEFVTAGSVGSGFDLPDRECPRCGEKLGKDGHDIPFETFMGFKGDKVPDIDLN
FSGEYQSRAHKYTEHLFGSDHVFRAGTISTVAEKTAYGYVRKFAEERGLQLRNAELTRLV
QGCTGIKRTTGQHPGGLMVVPSNKEIFDFCPIQFPADDKTAGTRTTHFDYHSIHDNLLKL
DLLGHDDPTVIRMLQDLTGVAPKEIPVDDPDTMSIFSGTEVLGVTPEQIRSTVGTYGIPE
FGTKFVRQMLEDTKPKTFAELVRISGLSHGTDVWLNNAQDLIRSGTARLSEVISTRDDIM
VYLIQKGMEPVQAFRIMESVRKGKGLTPEDEATMKEHGVPDWYIASCKKIKYMFPKAHAT
AYVLMAVRIAYFKVHNPLAFYATYFTVRADDFDLQLVLQGPDVVLRRIEAVEAKGSQATA
KEKSLLTVLEVALEMMQRGFRFGPLDLYRSDATRFVPDGEGTLIPPFSAVAGIGESAARN
VAAAREEGEFLSVQDLQERARLSRPVVELLEQMGCLKGLPQTNQLSLF
NT seq 4287 nt   +upstreamnt  +downstreamnt
atgacgcgtgcggtatcctcctacagtgcggatgcgccgaggccctgggtggcacggatt
ttacaattacgcccggagctgacgtcctatatgggccaaatcgatgtggtgcggatcgcc
gtgtcgccggaaagcctttccgggcgtgtgtacgtctccttgagccatcccctgccgccc
gatatgtgggcaaacctggaggacacgctgacaaatctggccgcctcctgcggcgggtgg
cgcgtcgaagtgtgggccgaggttgcggaccggaagggcgccgaagaggcggtggaagct
tattttcctgtttgtgctcgggatacggggtgtgccgaagggttatttggccagatccgc
ggcctttatgcgggcgaggggctgttgcgccttgtggcgccccacgagatggtatcggcc
gccgcacggcaccgcgggttggggcaggcggtccaagcgtggtaccgcagggtgctgggc
atttccatcaacgtgcagtgggatgtggaggccggagagtcgtttcaggaacttcgggaa
caatgcctggaagaggaacgggcaatggtggccgagttggtgtcggccccggaaaaggaa
gggccctctcccgcttccggaaaagaagaccctgtccttctcgggaagttcgtttctgac
gacccggtgccccttcgcagcattaccgaagaggtccgcagcgttgtcgccgaggggacg
gtctttttcattgaaacccgggaactttccagcgggcggattttgtatcatttttatctg
accgaccgcaccgattcgatctcggtgaaagctttcgccaaacccgatcagcggcaggcc
gggctcgacgggttgtcaaaaggggactgggttcgggtgcggggctcggtatcgtacgat
accttcgccaaagaactcgtcctgatggcccaggatgtgatgcgcgttcctccccgcgtt
cgcaaggaccagagcggggcgaaacgggtggagttgcacgtgcacacacccatgagcgcc
ctggacggcgtgagttcccccggggatctggtacgccgggcggcggagtgggggcactcg
gccttggcggtgaccgatcacggggttgcccaggcgtttccggacttctttcgggaagcc
cagaaggcggggatcaaacccatcctggggatcgaggcctatctggtggatgacgggtct
tcggtggtgtttggggcggaccaccgaccattggaggatgcggagttcgtcgtgttcgat
acggagaccaccggactgaacgcccgggaacataccctgattgaaatcgcggcggtcaaa
gtgcgggggggcgagttggtcgatcattatacctcgctcatcgacccgggagtgccgatt
tcgccgaagattcaagagttaaccgggatcacgagcgacatggtgaaaggtcagcccggg
ctgtcagaagttcttgaagcgttccggaagtttgcggccggggcggtccttgtggcccac
aacgccgagttcgacatggggtttttgcaatccgccgcccgcaagctcggacaacccccc
tgggaccatccggtgctggacactctggcactggcccgggtgctgtatccccgggagcgg
aatcaccgcctgaagaccttgacccagaaattcaatgtggagttggtcaaccaccaccgg
gcagcggcggacgccgaggccacggcgaaagtgttcctgcatctgttgcgggaagctgag
gcccgaggcgctcaccatctggacgaatgtaacgctctgggggaaggcatcgacgtctcc
cacgcccggccgtatcatgccacgattctcgtgaaaaaccccactggcttgaaaaatttg
taccgtctagtttccttggctcatacccggtacttgcatcgccagcctcggattcctcga
accgagtggctgaattaccgggaagggctgatgatggggacggggtgtttacggggagaa
ttgtttcaggcgttgttgcgggggcggtcggatgaggagctgctcgatatcattcagcgg
tatgattttgtcgaaattcagcccctggaccagtaccgccccctgttgcggaatgaagaa
attcgggatctggaagccgtcgccgaataccaccgccggatcttggaattggccgatcgg
gccggccggccggtggtggccacgggagatgtgcactatttggacccggaggatcgaatt
tatcgagatatccttcaggcggggtcgaacatggaagtggatgaccccgatgcggggtat
cattttcgcaccaccgaagagatgttggcggcctttggccatctggggccgcgggccgtt
gaagtggtggtggagaacgcaaatcgaattgccgaagagatcgaggtggtcaagccgatc
ccagacgagttgtacaccccggttatcgatggggcagaggaacaaatccggtctctggcc
tacgagaaagcccggcggctttacggcgatcccctgccggagttggtgaaggcccgactg
gagaaagaactgaacagcatcatcaaccacggttacgcggtgatttacttgatcgcccat
aaactggtaacacagtctttgaaggacgggtatctggtgggatcccggggttcagtggga
tcctccttggtcgccaccatgacggatattactgaagtcaatcccctgccgcctcattat
ctctgtccggcttgtcattacagcgagttcgtgaccgccgggtcggtgggctcggggttt
gatctcccggaccgggaatgcccgcggtgcggggaaaagttgggcaaagatggccacgat
attccctttgaaacgtttatggggttcaaaggggataaggtcccggacatcgatctaaac
ttctcgggagagtatcagagccgggcgcacaagtataccgagcatctgtttggttccgat
catgtgttccgggcggggacgatctccaccgtggccgagaaaacggcttatgggtacgtg
cgcaaattcgccgaggaacggggattgcaattgcgaaatgccgaactgacgcggttggtt
caggggtgtacgggcattaagcgaaccacgggccagcaccccgggggtctgatggtggtg
ccgagcaacaaagagatctttgatttttgtccgattcaatttccggcggatgacaagacc
gccggcacccggacgacccatttcgattatcattccatccacgataacctgttgaaattg
gatttgctcggccatgacgatcccacagtgatccggatgcttcaagacctcaccggcgtt
gcgccgaaggaaattccggtggacgatccggataccatgtcgattttcagtggcacggaa
gtgctgggggtcacgccggaacagatccgcagcaccgtggggacttatgggatccccgag
ttcgggacaaaattcgtccgccaaatgttggaggacacgaagccaaagacgtttgccgag
ttggtgcgcatctcgggattgtcccacgggacggacgtgtggctgaacaacgcccaagat
ctgatccggtccgggacggctcggttgtcggaagtgatctccacccgggatgacattatg
gtttatctaatccagaagggaatggaaccggttcaagcctttcggatcatggagtcggtc
cgcaaaggaaaggggctcacgccggaagatgaggcgacgatgaaagagcacggggtcccg
gattggtacatcgcatcttgtaaaaagatcaaatatatgtttccaaaagcccacgccacc
gcctatgtactgatggccgtgcggatcgcgtattttaaagttcacaatcccctggccttt
tatgccacatattttaccgtccgggcggatgatttcgatttacaactggtgctacagggg
cccgatgtggtgctccggcggatcgaggcggtggaagcaaagggcagccaagccacggcc
aaggagaagagtttgctcacggtccttgaggtggccctggagatgatgcaacggggattt
cggttcggtccgctggatctgtaccgatcggatgccactcggtttgttccggatggggaa
ggtacactgatccctcctttttcggccgtggccggaatcggggagtcggcggcccggaat
gtggcggcggcccgggaggaaggggagtttctttctgtgcaggatttgcaagaacgggct
cgtctgtccagaccggtggtggaactgctggaacagatggggtgtctgaaaggtcttccg
caaaccaatcaattgtctttgttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system