KEGG   Burkholderia ubonensis: BW23_2275
Entry
BW23_2275         CDS       T03794                                 
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
bub  Burkholderia ubonensis
Pathway
bub00550  Peptidoglycan biosynthesis
bub01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bub00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BW23_2275 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bub01002]
    BW23_2275 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bub01011]
    BW23_2275 (dacB)
Enzymes [BR:bub01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BW23_2275 (dacB)
Peptidases and inhibitors [BR:bub01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   BW23_2275 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:bub01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   BW23_2275 (dacB)
SSDB
Motif
Pfam: Peptidase_S13
Other DBs
NCBI-ProteinID: AJX16541
Position
I:complement(2447447..2448967)
AA seq 506 aa
MPISVLAARFALRARLCLRAAAVLAACTALSFAPPAQARKKPHKPPVVSAAARAAGLPPS
VLVALQRAKVPASAMSVVVERVGDPEPLVAWNASRPMLPASTMKLVTTFSGLSILGPDFR
WRTSAYADGTLDPDGTLQGNLYIKGTGDPKLVPEELIDLVDKIRKAGIKRVSGGLVLDKT
YFAASTRDLPAFDDDASAPYNVGPDPLLYAFKAVSFTLTPGDDGKVAIDVLPPLANLSID
NQLHEGNGSCGAASAAARPTLTAGDGMLTASFAGDYPLRCGARTTNLAILDHSTFFARGF
LALWQQDGGTIAGPVSEGKVPTTARPVAVHHSPVLGSVVYDINKFSNNVMARNLFLTIGA
ERGKPPATPEQSSRVIRAFLQKGGIAMPELVLDNGSGLSRDERVSAQSLAALLQAANASP
VAQAFIDSLPIAGIDGTMKNRLTNAGVLGNAHIKTGTLRDVRAIAGYVAGADGQSYVVVS
FINDDHAEAARAAHDSLLEWIYAGAR
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgccgatttccgtcctcgccgcccggttcgcgctccgcgcccgcctctgcctgcgcgcc
gccgccgtcctcgccgcctgtaccgccctgtcgttcgcgccgcccgcgcaagcccgcaag
aagccgcacaagccgcccgtcgtgtccgccgccgcgcgcgcggccggcctgccgccgtcc
gtgctggtcgcgctgcagcgcgcgaaggtgcccgcgtcggcgatgagcgtcgtcgtcgag
cgggtcggcgatccggagccgctcgtcgcgtggaacgcgagccgcccgatgctgccggca
tcgacgatgaagctcgtcacgaccttctcgggcctgtcgatcctcggccccgacttccgc
tggcgcacgtccgcctatgcggacggcacgctcgacccggacggcacgctgcagggcaac
ctgtacatcaagggcaccggcgatccgaagctcgtgccggaggaactgatcgacctcgtc
gacaagatccgcaaggccggcatcaagcgcgtgagcggcggcctcgtgctcgacaagacc
tatttcgcggcgtcgacgcgcgacctgccggcgttcgacgacgacgcgagcgcgccgtac
aacgtcggccccgacccgctgctgtacgcgttcaaggccgtctcgttcacgctgacgccg
ggcgacgacggcaaggtcgcgatcgacgtgctgccgccgctcgcgaacctgtcgatcgac
aaccagctccatgaaggcaacggctcgtgcggcgcggcgtcggccgcggcgcgcccgacg
ctgacggccggcgacggcatgctgaccgcgtcgttcgcgggcgactatccgctgcgctgc
ggcgcgcgcacgaccaacctcgcgatcctcgaccattcgacgttcttcgcgcgcggcttc
ctcgcgctgtggcagcaggacggcggcaccatcgcgggccccgtgagcgagggcaaggtg
ccgacgaccgcgcggcccgtcgccgtgcaccacagcccggtgctcggcagcgtcgtctac
gacatcaacaagttcagcaacaacgtgatggcgcgcaacctgttcctgacgatcggcgcg
gaacgcggcaagccgcccgcgacgcccgagcagtcgagccgcgtgatccgcgcgttcctg
cagaaaggcggcatcgcgatgccggagctcgtgctcgacaacggctcgggcctgtcgcgc
gacgagcgcgtgagcgcgcagtcgctcgccgcgctgctgcaggccgcgaacgcgagcccg
gtcgcgcaggcgttcatcgattcgctgccgatcgccggcatcgacggcacgatgaagaac
cggctcacgaacgcgggcgtgctcggcaacgcgcacatcaagaccggcacgctgcgcgac
gtgcgcgcgatcgccggctacgtcgcgggcgcggacggccagagctacgtcgtcgtcagc
ttcatcaacgacgatcacgcggaagccgcgcgcgccgcgcacgacagcctgctcgaatgg
atctacgcaggcgcgcgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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