KEGG   Burkholderia ubonensis: BW23_5256
Entry
BW23_5256         CDS       T03794                                 
Name
(GenBank) type VI secretion lipofamily protein
  KO
K11906  type VI secretion system protein VasD
Organism
bub  Burkholderia ubonensis
Pathway
bub03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bub00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BW23_5256
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bub02044]
    BW23_5256
Secretion system [BR:bub02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BW23_5256
SSDB
Motif
Pfam: T6SS-SciN DUF4893
Other DBs
NCBI-ProteinID: AJX12243
Position
II:complement(2229295..2229813)
AA seq 172 aa
MRRRSGGFIILGCVLLLPGCGATERAAAVPYAITVDVAPDVNPDLNRKPSPIVLKVFQLK
AASAFESADFFSLQDKPEGVLGADLLGVERIILRPGEARTLHYRGNVEAGALGVVAEYRV
LEKNRWRLTVPLPRAKQLNAYKFWQTSPGELKLSIAVRNGGIGLGGDARGRP
NT seq 519 nt   +upstreamnt  +downstreamnt
atgcgacggcggtccggtggtttcatcatcctggggtgcgtgctgctgctcccgggatgc
ggcgcgacggagcgcgccgctgcggtgccgtatgcgatcacggtcgacgtcgcgcccgac
gtcaatccggacctcaaccgcaagccgtcgccgatcgtgctgaaggtgttccagctcaag
gccgcgtcggcgttcgagagcgcggatttcttctcgctgcaggacaagccggagggcgtg
ctcggcgcggacctgctcggcgtcgagcggatcatcctgaggccgggcgaggcgcgcacg
ctgcattaccgcggcaacgtggaagcgggcgcgctcggcgtcgtcgccgaataccgcgtg
ctcgaaaagaaccgctggcggctcacggtgccgttgccgcgcgcgaagcagctcaacgcc
tacaagttctggcagacgtcgccgggcgagctgaagctgtcgatcgcggtgcgcaacggc
gggatcgggctcggcggcgatgcacgggggcgcccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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