KEGG   Burkholderia sp. CCGE1001: BC1001_0178
Entry
BC1001_0178       CDS       T01424                                 
Name
(GenBank) type VI secretion ATPase, ClpV1 family
  KO
K11907  type VI secretion system protein VasG
Organism
bug  Burkholderia sp. CCGE1001
Pathway
bug03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bug00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BC1001_0178
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bug02044]
    BC1001_0178
Secretion system [BR:bug02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BC1001_0178
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Sigma54_activat AAA_7 nSTAND3 AAA_30 NACHT Zeta_toxin AAA_25 AAA_18 IstB_IS21 TsaE AAA_24 AAA_14 T2SSE NTPase_1 ResIII SRP54 Clp_N DUF815 AAA_33 AAA_6 Hpr_kinase_C HerA_C
Other DBs
NCBI-ProteinID: ADX53643
Position
1:198420..201167
AA seq 915 aa
MSVSRQALFRKLGTTLFKSAESATAFCKLRGNPYVELIHWLHQILQLSDSDLHRILRHFG
VDMAVLERDMARSLAALPAGASSISDFSHYIDEAVERAWVIATLSFGDTRVRGAWLVAAL
VGTPELRRLLLSISPAFAKIQVDGLHQSMPAWIDGSPEAEDVTLEANGSGGAVPGEASAA
MAPAAKGTPLEQFCTDLTAQAREGGIDPVIGRDLEIRTMVDVLLRRRQNNPLLTGEAGVG
KTAVVEGLARAIASSDVPPKLIGVRLLALDVGGLLAGASMKGEFESRLKGVLEQAACSPS
PIILFVDEIHTLIGAGGQAGTGDAANLLKPSLARGTVRMIGATTWSEYKRHIEKDPALTR
RFQVLQVQEPAEPAAVDMVRGLAATFSRHHGVVVRDEAIRAAVALSHRYIPSRQLPDKAI
SLLDTACARVALSQHTAPRELQDVRQRVLAARVELELVDKEARMGLHADKALLAVKQRID
ALVSSRRELEARWQAQLEAAQSLLAARESAENDADTSADKDGNLSATLKTLRALELRLSA
VQGDLPLVFPDVNEAVVAGVVSDWTGIPVGRMVTDQLAAVRSLPAALAARVIGQTDALRE
ISERVQTARAGLTDASKPLGVFLLVGPSGVGKTETALALAEALYGGEQNLITVNMSEYQE
AHTVSGLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEMFFQVFDKGYM
EDGDGRYIDFRNTTILLTSNVGAELSMSLHADASLAPDATGLRDALAPELLKAFPAAFLG
RVSVVPYRPLAQESLASVARLHLERVVHRMAERHEIALMYGHSVVDYIVARCPVQETGAR
VLIGFIEQHILPRLSALWLDAFSANESVASIAIEVADPTLPPATALKFRATHAVAPGDSA
DVRAACHPIPVEQPA
NT seq 2748 nt   +upstreamnt  +downstreamnt
atgagtgtttcgcggcaggcactgtttcgcaaattggggacgacgcttttcaaaagcgcc
gagtcggccactgccttttgcaagctacgcggcaatccctacgtcgagctcattcactgg
ttgcatcagattctgcagttgtccgacagtgaccttcaccggatcctccgtcacttcggt
gttgacatggccgtgcttgagcgcgacatggcgcgctcgctggcggcgctgcccgcaggc
gccagttcgatcagtgatttctcgcattacatcgacgaggccgtggaacgcgcgtgggtg
atagccacgctttcgttcggtgacacacgggtgcgcggagcctggctggtcgccgccctg
gtcggcacaccggagctgcggcgactgctgctctccatttcgccggcctttgcaaaaatc
caggtggacggcttgcaccaaagtatgccggcatggatcgacggctctcctgaggcggaa
gacgtcaccttagaagccaacggttcaggcggcgccgtgccaggcgaagcatcggccgcg
atggcgccggctgcaaaaggcacaccgctcgagcagttctgcaccgatctcaccgcacag
gcacgcgagggcggcattgatcccgtgatcggccgcgatctcgagatccgaacgatggtc
gatgtcctgcttcggcgccgtcagaacaacccgctgctgacgggcgaggcgggcgtgggc
aagacagccgtcgtcgagggactggcgcgcgccatcgcttcctctgacgtccccccgaag
ctgatcggggtgcgcctgctcgcgctcgacgtgggcgggctgctcgcgggcgcgagcatg
aagggggaattcgagtcgcggctcaagggcgtgctggagcaggccgcgtgctcgccgtcg
ccgatcattctgttcgtcgacgaaatccatacgctgatcggagcaggcggccaggccggc
acgggcgacgcggccaacctgctgaagccgtcgcttgcgcgcggcacggttcgcatgatc
ggggccacaacatggtccgagtacaagcggcacattgagaaagaccccgcgctcacgcgt
cgttttcaggttctgcaagtgcaggagcccgcggagccggccgcggtcgatatggtgcgc
ggactcgcggctacgttttctcgacatcatggtgttgtcgtgcgcgacgaggcgatccgt
gcggccgttgcgttgtcgcatcgctacatcccttcgcgtcagctcccagacaaggcgatc
agcctgctggacacggcgtgcgcgcgcgttgcgctgtcgcagcacacggcgccacgcgag
ttgcaggatgtccgtcaaagggtgctcgccgcgcgtgtcgaactggagcttgtcgacaag
gaagcgcgcatgggcttgcatgcggacaaggcgctgctcgccgtgaagcagcggatcgac
gcgctggtttcttcgaggcgcgagctcgaagcgcgttggcaggcgcagcttgaggccgcg
caaagtctccttgcggcacgcgagtccgcagaaaacgatgcggacacgagcgcggataag
gacgggaacttgtccgcgacgttgaagacgttgcgtgcgctcgaactgcgcctgtccgcc
gtgcaaggcgacctgccgctcgtgtttccggacgtcaacgaagccgtcgtcgctggggtg
gtctccgactggaccggcattcccgtcggtcgcatggtgaccgaccagctggcggcagtg
cggtcgctgccggctgcgctcgccgcgcgcgtgatcggacagacggacgcgcttcgcgag
atcagcgaacgcgtgcagaccgcgcgcgccggtttgaccgacgccagcaaaccacttggt
gtgttcctgctcgtgggcccgtcaggcgtcggcaagaccgagacggccctcgcgctggcc
gaggcgctttatggcggggagcagaacctgatcacggtcaacatgagcgagtatcaggag
gcgcataccgtgtcgggcctgaagggagcgccgcccggatatgtcggctatggtgaagga
ggcgtgctgacggaagctgtacgccgccgcccgtattccgtggtgctgctggacgagata
gaaaaggctcaccgcgacgtgcacgaaatgttcttccaggtgttcgacaagggctacatg
gaagacggggacgggcgttacatcgacttccgcaatacgaccatccttctcacgagcaac
gtcggcgcggaactcagcatgagcctgcatgccgatgcttcgctcgcaccggacgccacg
ggtttgcgcgacgcgcttgcgcccgaactgctgaaggcgtttccagcagcgtttcttggc
cgcgtcagcgtcgttccctaccggccgcttgcgcaggagtcgctcgccagcgtcgcgcgc
ctgcatctcgaacgcgtggtgcaccgcatggcggagcggcacgaaatcgcgctcatgtac
gggcacagcgttgtcgattacatcgttgcgcgctgccctgtgcaggagacgggcgcgcgc
gtgctcatcggttttatcgaacagcatattctgccccggctttcggccttgtggctcgac
gcgttctcggcgaacgagagtgtggcgagtattgcgatcgaggtcgcggatccaaccctg
cctccggctaccgcgctgaaatttcgcgcgacgcatgccgttgcgcccggcgattcagca
gatgttcgtgccgcctgtcaccccattccggtcgagcagcccgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system