KEGG   Burkholderia sp. KJ006: MYA_3505
Entry
MYA_3505          CDS       T02110                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
buk  Burkholderia sp. KJ006
Pathway
buk03030  DNA replication
buk03430  Mismatch repair
buk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MYA_3505
   03430 Mismatch repair
    MYA_3505
   03440 Homologous recombination
    MYA_3505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buk03032]
    MYA_3505
   03400 DNA repair and recombination proteins [BR:buk03400]
    MYA_3505
Enzymes [BR:buk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MYA_3505
DNA replication proteins [BR:buk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MYA_3505
DNA repair and recombination proteins [BR:buk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MYA_3505
SSDB
Motif
Pfam: RNase_T Peripla_BP_3 RNase_H_2 CheR_N
Other DBs
NCBI-ProteinID: AFJ87864
UniProt: I2DT88
Position
2:641672..642289
AA seq 205 aa
MQTVAVLDFETTGLSPNLGDRATEIAVILLRDGEIVDRYQSLMNAGRRIPSDVVALTGIT
NEMIATAPPVSKVMKEAAAFVGSHPVVAHNAGFDKRFWQAELGSLGVAADHPFACTMLVA
RRLYPHARSHRLSSLADLLRLPQAGRAHRAMVDAEIASHLWCRMQRDIGETYGLRHVDHR
LMSRLQTTSKAKVATFFGSLSAAGR
NT seq 618 nt   +upstreamnt  +downstreamnt
atgcaaaccgtagcggtactcgacttcgaaacaaccgggctttccccgaacctgggcgac
agggcgaccgagatcgccgtgatcctgctgcgcgacggcgagatcgtcgaccgctatcag
agcctgatgaacgcgggacgccgcattccgtccgacgtcgtcgcgctcaccgggatcacg
aacgagatgatcgcgacggcgccgccggtgtcgaaggtgatgaaggaagccgccgcgttc
gtcggcagccatccggtcgtcgcgcacaacgcggggttcgacaagcgattctggcaggcc
gaactcggctcgctcggcgtcgcggccgaccatccgtttgcatgcacgatgctggtggcg
cggcgcctctacccgcatgcgcgcagccaccggctgtcgagcctcgccgacctgctgcgc
ttgccgcaggccggccgcgcgcaccgcgcgatggtcgacgcggagatcgcgagccatctg
tggtgccggatgcagcgcgacatcggcgaaacttacgggctgcggcacgtcgatcacagg
ctcatgtcgcgtctgcagacgacgagcaaggcgaaggttgcgacgttcttcggttcgttg
tcggcggcggggcggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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