KEGG   Caballeronia insecticola: BRPE64_ACDS04380
Entry
BRPE64_ACDS04380  CDS       T02684                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
buo  Caballeronia insecticola
Pathway
buo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:buo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BRPE64_ACDS04380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buo03019]
    BRPE64_ACDS04380
Messenger RNA biogenesis [BR:buo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BRPE64_ACDS04380
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 CMS1
Other DBs
NCBI-ProteinID: BAN22192
UniProt: R4WW93
Position
1:complement(448806..450332)
AA seq 508 aa
MSFDSLGLSEPLLRAVNELGYSSPTPIQLQAIPAVLKGGDLLAGAQTGTGKTAGFTLPIL
QRLSQLAPAAGSAKRPVRALILTPTRELAAQVEESVRAYGKYLKLRSTVMFGGVGINPQI
EALRRGVDIVVATPGRLLDHMQQKTIDVSKLEILVLDEADRMLDMGFIHDIKRVLARLPE
KRQNLLFSATFSDEIKALADGLLDSPALIEVARRNTTAETVEQKIHPVDRDRKREMLTHL
IRSNNWFQVLVFTRTKHGANRLAEQLGKDGISALAIHGNKSQSARTRALAEFKDQTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAEGEAVSLVCVDEHQLLKD
IERLIKRPIPQEVIPGFEPDPSAKPEPIQRRSQGRSQGRGQGQGQGQGQGRQGQGQRSGE
ARREGGRPSGEARGAARPPKASSGAQPARDGRSQPKPAAKPVAGAGQAPRRAEPAKAPQA
DNRRKPAANPGALLSGRRDAPRSSNRGH
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcttttgattcactcggcctgtccgaacccttgctccgcgccgtcaacgaactcggc
tactccagccctaccccgattcagctccaggcgattcccgccgttctgaagggcggcgac
ctgctcgcgggcgcgcaaaccggcacgggcaagaccgccggcttcacgctgccgatcctg
cagcgtctgtcgcagctcgcgccggccgcgggcagcgcgaagcgccccgtgcgcgcactg
attctcacgccgacgcgcgaactcgccgcgcaggtcgaggaaagcgtgcgcgcctacggc
aagtatctgaagctgcgctcgaccgtgatgttcggcggcgtcggcatcaatccgcagatc
gaggcgctgcgccgcggcgtcgatatcgtcgtggcaacgcccggacgcctgctcgatcac
atgcagcaaaagacgatcgacgtgtcgaagctcgaaatcctcgtgctcgacgaagccgac
cgcatgctcgacatgggcttcatccacgacatcaagcgcgtgctcgcacgcctgccggag
aagcgccagaacctgctgttctcggccaccttctccgacgaaatcaaggcgctcgccgac
ggcctgctcgattcgcccgcgctcatcgaagtcgcgcgccgcaatacgacggccgagacg
gtcgagcagaagattcatccggtcgatcgcgatcgtaagcgtgaaatgctcacgcatctg
atccgcagcaacaactggttccaggtactcgtgttcacgcgtaccaagcacggtgcgaac
cgtctcgccgaacaactcggcaaggacggcatcagcgcgctcgcgattcacggcaacaag
agccagtcggcccgtacacgcgcgctcgccgaattcaaggatcagacgctgcaggtgctg
gtcgcgaccgatatcgcggcgcgcggcatcgacatcgatcaactgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccgcatcggccggacggggcgcgcg
ggcgcggaaggcgaagcggtgtcgctggtctgcgtggacgagcatcagttgctgaaggac
atcgaacggctcatcaagcgtccgattccgcaagaagtgattccgggcttcgagcccgat
ccgagcgcgaagcccgaaccgatccagcgccgcagccaggggcgcagccaggggcgcggt
cagggtcaaggtcaggggcaaggccaagggcgtcagggacaggggcagcgcagcggcgaa
gcccgtcgcgaaggcggtcgtccgagcggtgaggcgcgaggcgcggcgcggccgccgaag
gcaagcagcggcgctcagcccgcgcgcgacggacgcagccagcccaagccggcggccaag
cccgttgcgggcgcgggacaggccccgcgccgcgccgagccggcaaaggcacctcaagcc
gacaaccgacgcaaaccggcggccaatcccggcgcgctgctcagcggccgccgcgacgcg
ccgcgttccagcaaccgcggccactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system