KEGG T04094: AC233

Burkholderia sp. HB1: AC233_23950

Entry

AC233_23950       CDS       T04094

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

buq Burkholderia sp. HB1

Pathway

buq03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:buq00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AC233_23950
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buq03400]
    AC233_23950
Enzymes [BR:buq01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AC233_23950
DNA repair and recombination proteins [BR:buq03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AC233_23950

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2

Other DBs

NCBI-ProteinID:

ALE57544

Position

2:complement(869334..870140)

AA seq 268 aa
MATLRIATFNINGIRSRQAALLQWLEREAPDIVCLQELKAADSAFPADAVRDAGYHAIWH
GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYLEVAVDGLLVCCLYLPNGNPQPGPK
FEYKLKWFDHLIDHAANLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPESRERY
RRLLAQGWTDSLRTHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDAGVDR
WVRGEPHASDHAPTWVELDMSARRRKTR

NT seq 807 nt +upstreamnt +downstreamnt
gtggcgacgctgcgcattgcgacgttcaacatcaatggaatccgctcgcgtcaggccgcg
ttgctgcaatggctcgagcgcgaggcgccggacattgtctgtctgcaggaattgaaggcg
gcggacagcgcgttccccgccgatgccgtgcgcgacgccggatatcacgcgatctggcat
ggccagagcgcgtggaacggcgtggcgatcctgtcgaagggcgaagcgccgctcgaaagc
cgccgcggcttgccgggcttcgaggccgacacgcatagccgctatctcgaagtggccgtc
gacggattgctcgtgtgctgtctctatctgccgaacgggaatccgcagcccggtcccaag
ttcgaatacaagctgaagtggttcgaccatctgatcgaccacgcggcgaatctgctcaag
agcgggcatccggtcgtgctggccggcgacttcaacgtcgtgcccaccgatgaggacatc
tacaatccgcgctcatggctgaaagacgcgctattgcagccggaaagccgcgaacgttat
cggcgcctgctcgcgcaaggctggacagattcgttgcgcacgcactttggcgacgagcgc
gtctataccttctgggattattttcgccgccactgggacaccaactcgggcttgcgcatc
gatcacatcttgctgagcccggacctcgcaccgcgtttgcgcgacgcgggcgtggatcgc
tgggtgcgcggcgagccgcacgcgagcgaccacgcgccgacatgggtcgaactggatatg
agcgccaggcggcgtaaaacgcgttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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