KEGG Burkholderia_383: Bcep18194

Burkholderia sp. 383: Bcep18194_B2754

Entry

Bcep18194_B2754 CDS Burkholderia_383

Gene name glyA

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway bur00260 Glycine, serine and threonine metabolism
bur00460 Cyanoamino acid metabolism
bur00670 One carbon pool by folate
bur00680 Methane metabolism
bur01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:bur00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:bur00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:bur00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:bur00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP
OKR_DC_1
PROSITE: SHMT

Other DBs NCBI-GI: 161702974
NCBI-GeneID: 3754521
JGI_2: Bcep18194B2754
UniProt: Q391K1

Position 2:complement(3120722..3121969)

AA seq 415 aa
MFNRTTSTVANVDPELYAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYEAAEQLAQEHKPKLIVAGASAFSL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGVKEAEIVGNLIADVLEAPEDAATLERVRGQVAELTKRFPVYG

NT seq 1248 nt +upstreamnt +downstreamnt
atgttcaaccgcaccaccagcaccgttgccaacgtcgatccggaactttatgccgcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggccgtgatggctgcgcagggttcgcaactcacgaacaagtacgcggaagggtat
ccgggcaagcgctactacggcggctgcgaatacgtggacgtggttgagcagctggcgatc
gaccgcgtgaagcagctgttcggtgcggaagcggcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgcccgtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgaaaacgaagacatcgactacgaagcggccgag
cagctcgcgcaggaacacaagccgaagctgatcgtcgcaggcgcgtcggcattctcgctg
aagatcgatttcgagcgtctggcgaagatcgcgaagtcggtcggcgcgtacctgatggtc
gacatggcccactacgcaggcctgatcgcagcgggcgtgtacccgaacccggtgccgcac
gcagacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagccgatcaactcggcgatcttcccggggatccagggc
ggcccgctgatgcacgtgatcgcgggcaaggccgtggcgttcaaggaagcgctgtcgccg
gaattcaaggcgtaccaggagaaggtggtcgagaacgcccgcgtgctggctgaaacgctg
gtgaagcgtggcctgcggatcgtgtcgggccgtacggaaagccacgtgatgctggtggac
ctgcgtgcgaagaacatcacgggcaaggcagcggaagcagcgctgggtgctgcgcacatc
acggtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgcctgggttcgccggcaatgacgacgcgcggcttcggcgtgaaggaagcggagatcgtc
ggcaacctgatcgccgatgtgctggaagcgccggaagatgcggccacgctcgagcgtgtg
cgcgggcaggtcgccgaactgacgaagcgtttccccgtctacggctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI_2-BUR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (23)

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