KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_01820
Entry
AYM40_01820       CDS       T05111                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AYM40_01820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_01820
Enzymes [BR:buz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AYM40_01820
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AYM40_01820
SSDB
Motif
Pfam: AAA_30 AAA_19 Viral_helicase1 UvrD_C_2 HHH_4 AAA_11 AAA_22 nSTAND3 SH3_13 AAA_16 PIF1 AAA_14 UvrD-helicase CbiA AAA ABC_tran AAA_28 DUF4926 NTPase_1 NACHT AAA_12 ATP_bind_1 AAA_18 TrwB_AAD_bind AAA_24 SRP54
Other DBs
NCBI-ProteinID: ANB71240
UniProt: A0A160FGM4
Position
1:406674..408920
AA seq 748 aa
MSDPTNVTLRVTGVRSQNPRGFGGAIFTGVPVDATGSVLDACTYVVVKATRATLGGTKVE
RGQWWTVAGQLVERRSVVDGFELVEQQVDAEVAYLARPTGEHLVTFIAENPAFEGLGTVK
ARRLWERFGEQLYQLLDAADPSPFADVLSAAAAQRLVEAWACHGESRTLQWLQAAGFDIG
LGRKVLRYFGGEAQARIEEDPYRLLSFAGKWSTVDLMAQTQFGVQSDDPRRLRGAGEEAC
YRMFAAGHTAMLSADLVEQVAPLLGRPPVGVQWRDLLATAVSEGLKSGHIVQTQHGLQPL
GALVMERQVAKAIQERLTGGIERLLPGHRVERIITACEAEDGIELNPEQRNAIRMADEYA
FACITGGAGVGKTTVLRSLCRLYQDAGTKVLQVALAGRAAKRMQEATGLPAFTIASFLKS
VNNLTFDGPTVLVIDEASMVDIVSMSRLCQALLPHVRLVLVGDPYQLMPVGPGLVLHCVM
RVPRIPSTELKTVKRYGGEIAAVASAVREGVWPSISADETASVAFIHCDDRQIAERVADL
YAVDTAGTQVLAPLRNGPAGTKVLNQVCQQRFTGDGPTVTRWNDEFDRPEYCGFNLGDVV
LCTRNLWDKGLQNGSMGRVVEVESLATKPSDDAERVLAWVEWDDGVCRELTSEMLEDVEL
GFAATVHKAQGSQWRRVIIPVTRSRLLDRTLLYTALTRAQVQVILVGDVEAAQKAVEAPP
KAHSRKVALDLALMHYLMQADDNVLLPA
NT seq 2247 nt   +upstreamnt  +downstreamnt
gtgagcgaccctacgaacgtcacgctgcgtgtgacgggggtcaggtctcagaaccctcga
ggcttcggcggagccatcttcaccggggttcccgtcgatgctactgggtctgtccttgac
gcgtgcacttatgtcgtcgtcaaggcgacccgggctacccttggcggaacaaaggtcgag
cgaggccaatggtggacggttgcaggacagctggttgagcgccggtccgtggttgacggc
ttcgagctggttgagcagcaggtcgatgcggaggtcgcgtatctcgcccgcccgaccggc
gagcatctcgtcacgttcattgccgagaaccccgccttcgagggactcggaacagtcaaa
gccagacggctctgggagcgcttcggcgagcagttgtatcaattgctggacgcggccgac
ccgtcgccgttcgccgacgtcctctctgctgcggcagctcagcgtctggttgaggcctgg
gcttgtcacggcgagtcccgcacccttcagtggcttcaggccgctggcttcgacatcgga
ctgggacggaaggtgctgcggtacttcggtggtgaagcgcaagctcgcattgaggaagac
ccctatcgcctgctatcgtttgccggcaaatggtcgaccgtcgacctgatggcacaaacg
cagttcggcgttcagtccgacgaccctcgccggctgcggggagccggcgaggaggcgtgc
tatcggatgttcgccgccggccacacggcaatgctgtcggcggacctggtcgagcaggtc
gccccgctgctgggacgaccgccagtcggcgttcaatggcgagatttgctcgcgaccgcc
gtgtcggagggcctcaaaagcggccacatcgttcagacgcagcacggcctgcaaccgctg
ggcgctctggttatggagcgtcaggtagccaaggctatccaggagcgtttgaccggcggc
atcgagcgactgcttcctggtcatcgggtcgagcgaatcatcacggcttgcgaagctgaa
gacggcattgagctgaacccggagcagcggaatgctatcaggatggccgacgagtacgcg
tttgcctgcatcaccggtggggctggcgtgggcaagacgaccgtgctcaggtcgttgtgt
cggctgtatcaggacgcaggaaccaaagtgctacaggtggcacttgcaggacgcgcagcg
aagcggatgcaggaagccactggtctgcccgcattcacgattgccagcttccttaagagc
gtcaacaacctgaccttcgatggtcccacggtgttggtcatcgatgaggcgagcatggtt
gacatcgtctcgatgagccgcctgtgccaggcgctacttcctcacgtacgactcgttctc
gttggtgacccctaccagctcatgccggtcgggcctggtctcgtccttcactgtgtcatg
agggtgccacgcattccctcgaccgagctcaagaccgtgaagcgctatggaggggagatt
gccgccgtggcttcggccgtgcgggagggggtgtggccgagcatctctgccgacgagacg
gcgtccgttgccttcatccattgtgatgaccggcaaatcgcggaaagagtggcggacctt
tatgccgtcgataccgctggcacgcaggtccttgcgccgctgcgaaacggcccggcaggg
accaaggtactcaaccaggtctgccagcagcgattcaccggcgacgggccaactgtgact
cggtggaacgacgagttcgacaggcctgagtactgtggtttcaaccttggagatgtcgtt
ctctgcactcgcaacctctgggacaaaggactgcagaacgggtcaatgggtcgggttgtg
gaggtcgaatccctcgctaccaagcccagcgatgacgctgaacgggtgctggcctgggtc
gagtgggacgatggcgtttgccgggagctcacgtccgagatgcttgaggatgtcgagctc
gggttcgcggcgacggttcacaaggcccaaggctctcagtggcgccgcgtcatcatcccg
gtcaccaggtcaaggctgctggaccgaacgctgttatacacagccctcactcgtgcccag
gttcaggtcatcctggtcggagacgtcgaggccgcccaaaaggcagtggaagccccgccg
aaggcacacagtcgaaaggtagcgttggacctagccttgatgcattacctcatgcaagcc
gacgataatgtccttctgccggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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