KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_13060
Entry
AYM40_13060       CDS       T05111                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:buz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    AYM40_13060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_13060
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     AYM40_13060
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29 AAA_23
Other DBs
NCBI-ProteinID: ANB73187
UniProt: A0A161HYJ9
Position
1:2982901..2985597
AA seq 898 aa
MGIQTAAANDVAQHTPMMQQYLRIKADHPGTLVFYRMGDFYELFFEDAEKAARLLDLTLT
QRGASAGNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTP
GTLTDAALLSDKSDVYLMALCVAHNRRGVATSIGLAWLNLASGALRLAEVAPDQVAAALE
RIRPAEILVADTLADSASWTPPVNAGALTRVPVWHFDITSGTQRLCDQLEVAGLDGFGAH
SLTAACGAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLRGTES
PTLCSLLDTCCTTMGSRLLRHWLHHPPREAAVAQARQQAIGALLDAPPGAGVETLRGALR
QISDIERITGRLALLSARPRDLSSLRDTFIALPELRTQLAAVSSNADSLARIDASLEPPQ
ACVELLKRAVAQEPSAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIG
NLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERAL
ARERSLYDALLQALLPFIPDCQRVAAALAELDLLTAFAERARALDWVAPTFSPDTGIEIE
QGRHPVVEAQVEQFIANDCTLTPERKLLLITGPNMGGKSTFMRQTALIALLAYVGSYVPA
RRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTF
DGLALAWAIARHLLSHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAV
SEGPANQSYGLQVAQLAGVPNAVIRAARKHLAHLEQQSAAQPAPQLDLFAAPMPMLVEDA
DDERDQRHDTPASAAASPAMQLLVERLRAIDPNDLRPREALDLLYELHELAAAPDADH
NT seq 2697 nt   +upstreamnt  +downstreamnt
atgggcattcaaaccgcagcggccaatgacgtcgcacaacacacgccgatgatgcagcag
tacctgcgcatcaaggcggatcatcccggcacgctggtgttttaccggatgggcgacttc
tacgagctctttttcgaagatgcggaaaaggctgcgcgtttgctcgatttaacacttacg
cagcgcggcgcgtcggcgggcaacccgatcaagatggcgggcgtgccgcatcacgcggtc
gaacagtatctggccaagctggtgaagctcggcgaatccgtcgcgatttgcgagcagatc
ggcgatccggctacgtcgaaggggcccgtggagcgcaaagtcgtgcgcgtggtaacgccg
ggcacactgacagacgcggcacttctgtccgacaagagcgacgtctatctgatggcgctg
tgcgtcgcgcataaccgccgcggcgtcgcaacgagcatcgggctcgcgtggctgaatctg
gcgagcggcgcattgcgcctcgccgaagtcgcgcccgaccaggtagccgccgcgctcgaa
cggattcgtcccgcagaaattctggtggccgacaccctcgcggactctgcgagctggacg
ccgcccgtcaacgccggcgccctcacccgcgtgccggtctggcacttcgatatcacctcg
ggcacacagcgtctgtgcgatcaactggaggtggccggcctcgatggcttcggagcgcat
tcgctgacggcggcatgcggcgcggcgggcgcgctgctgctgtatgcggcggccacgcaa
ggccagcaattgcgtcacgtgcgcagcctgaaggtcgagtacgagtccgaatatatcggg
ctcgaccctgccacgcgccgcaatcttgaactcacggaaacgctgcgcggcaccgaatcg
cccacactgtgctcgctgctcgacacctgctgcacgacgatgggcagccgtctgctgcgt
cactggctgcaccatcccccacgcgaagccgctgtggcgcaagcacgtcagcaggccatc
ggcgcattgctcgacgcgccgccgggcgcaggcgtcgaaacgctgcgcggcgcgttgcgg
cagatctccgacatcgagcggattaccgggcgtctcgcgctgctgtcggcgcggcctcgc
gatctgtcgagcctgcgcgatacattcatcgccttgcccgagttgcgcacacaactcgcg
gccgtttcgtccaatgcggattcgctggcgcgtatcgacgcgtcgctggaaccgccgcaa
gcgtgtgtcgaactgctcaagcgcgcggtcgcgcaagaaccctccgccatggtgcgcgac
ggcggcgtgatcgcccgcggctacgatgcggaactcgatgagttgcgagatatttcggag
aactgcggacagttcctgatcgacctcgaaacgcgcgaacgggcgcgcaccggcatcggc
aatctgcgggtcgagtacaacaaggtgcacggcttctatatcgaagtcacgcgcggtcag
accgacaaggtgccggacgactaccgccgccggcagacgctgaaaaacgccgagcgttac
atcacgccggaactgaaaacgttcgaagacaaggcgctgtccgcgcaggagcgcgcgctg
gcccgcgaacgctcgctgtacgacgcgttgctgcaagcgctgctgcctttcatcccggat
tgccagcgggtcgccgcagcactcgccgaactcgatctgctgacggccttcgccgagcgc
gcccgcgccctcgattgggtcgcgccgacgttttcgccggataccggcatcgaaatcgaa
caaggccggcatccggttgtggaggcgcaggtcgagcagttcatcgctaacgactgcacg
ctcacaccggagcgcaaactgctgctgatcaccggcccgaacatgggcggtaagtcgacc
ttcatgcggcagactgcgctgatcgcgttgctcgcgtacgtcggcagctatgtgccggca
cggcgcgcggcattcggtccgatcgatcgcatcttcacgcggatcggcgcggcggacgat
ctggccggcggccgttcgaccttcatggtggagatgacagaagcggcggcgatcctgaac
gacgcgaccccgcaaagtctcgtgctgatggacgagattgggcgcggcacgtcgacgttc
gacggcttggcgctagcgtgggccatcgcgcggcacctgctctcgcacaacggctgtcat
acgctgttcgccacgcactacttcgaattgacgcagttgcccgccgagtttccacaggcg
gccaatgtgcacctgtcggcagtcgagcatgggcacggcattgtgttcctgcatgcggtc
agtgaaggtccggcgaatcagagttacgggttgcaggtcgcgcaactggccggtgtgccg
aacgcagtgatccgcgcggcccgcaagcatctcgcgcatctcgaacagcaatcggcggcg
caacccgcaccgcaactcgatctgttcgccgcacccatgcccatgctggtcgaagacgcc
gacgacgaacgcgatcaacgccatgacacgccggcatcggcggcggcatcgccggccatg
cagttactcgtcgagcgtttgcgcgcaatcgacccgaacgatctgcgcccgcgcgaagcg
ctcgatctgctgtacgaactgcacgagctggccgccgcgccggatgcagatcattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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