KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_14495
Entry
AYM40_14495       CDS       T05111                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Pathway
buz03030  DNA replication
buz03430  Mismatch repair
buz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:buz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AYM40_14495
   03430 Mismatch repair
    AYM40_14495
   03440 Homologous recombination
    AYM40_14495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:buz03032]
    AYM40_14495
   03400 DNA repair and recombination proteins [BR:buz03400]
    AYM40_14495
Enzymes [BR:buz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AYM40_14495
DNA replication proteins [BR:buz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AYM40_14495
DNA repair and recombination proteins [BR:buz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AYM40_14495
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ANB73436
UniProt: A0A160FMI1
Position
1:3322529..3323263
AA seq 244 aa
MRQLILDTETTGLNARTGDRILELGCVEMVNRRLTGNNLHFYINPERDSDPGALAVHGLT
TEFLSDKPKFAEIADQIRDFIQDADLIIHNAPFDIGFLDAEFALLGLPPVKTCCGEIIDT
LARAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GDSHGDGDAHAPRIAIDSLNLVVIAASDDEVAEHQAVLDGLDKAVKGTSVWRLDPSPAAD
EQTA
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcgtcaactcatcctcgataccgagaccaccggcctgaatgcgcgaaccggcgaccgg
atccttgaactcggttgcgtcgaaatggtgaaccgccggctcactggcaacaacctgcat
ttctacatcaacccggaacgcgacagcgatccgggtgcactggccgttcacgggctgacc
accgagttcctgagcgacaaaccgaagttcgcggagattgccgatcagattcgcgacttc
attcaggacgcggacctgatcattcacaacgcgccgttcgacatcggctttctcgatgcc
gaatttgcgctgctgggtttgccgccggtgaaaacctgctgcggcgagatcatcgatacc
ttggcgcgcgccaagcagatgttcccaggcaagcgcaattcgctcgacgcgctgtgcgac
cgcttcggcatcagcaacgcgcaccgcaccttgcacggcgcactgctcgactcggaactg
ctcgccgaggtgtatctggcgatgacgcgcggccaggaaagcctggtcatcgacatgctc
ggcgattcgcacggtgacggcgacgcgcacgcaccgcgcatcgcgatcgactcgctgaat
ctggtcgtgatcgccgcgagcgacgacgaggtcgccgaacatcaggccgtgctcgacggt
ctcgacaaagcggtcaaaggcaccagcgtgtggcgtcttgatccctcgccagccgcggat
gagcaaaccgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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