KEGG   Beta vulgaris (sugar beet): 104906735
Entry
104906735         CDS       T03548                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
bvg  Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:bvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bvg03019]
    104906735
   03041 Spliceosome [BR:bvg03041]
    104906735
   03036 Chromosome and associated proteins [BR:bvg03036]
    104906735
Enzymes [BR:bvg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104906735
Messenger RNA biogenesis [BR:bvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     104906735
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104906735
Spliceosome [BR:bvg03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    104906735
Chromosome and associated proteins [BR:bvg03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    104906735
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 104906735
NCBI-ProteinID: XP_010693834
Position
3
AA seq 630 aa
MRTSWADSVAAENENGASSTARPTKATYVPPHLRNRPPSADSSSGPPQAAPPLVNDRPVL
GAPPGGPRWAGGSRPDFGRGGGGGTGYPGGGRGGGAGWNNRGGGWDRGRDREVNPFANDE
AEEEPEQAFGEQENSGINFDAYEDIPVETSGDSVPPPVNTFADIDLGKELNANIKRCKYV
KPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQEIQKPRGYRTVYPLA
LILSPTRELSVQINEEARKFAYQTGVRVVVAYGGAPISQQLRELERGVDILVATPGRLVD
LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQTDMPPRGVRQTMLFSATFPKEI
QRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLIHAQKANGAHGKQAL
TLVFVETKKGADALEHWLGMNGFPATSIHGDRTQQERELALRSFKSGNTPILVATDVAAR
GLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPMAELMQEA
NQEVPDWLVRYASRASYGGGRNRRTGGGRFGGRDFRRDGGGFNNRGGGGNDYYGGSNSGG
GGYYGGGGGGGGGGVVGGGGYNPGASSAWD
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaggacttcatgggcggattccgtggcggctgagaatgagaatggagctagcagtact
gctaggccaaccaaggccacctatgtaccaccacatcttcgtaacagaccgccgtctgca
gattcttcatctggcccaccacaggctgcacccccgctggttaatgataggccggtcctt
ggtgccccgcctggaggccctcggtgggctggtggttctagacctgattttggccgtggc
ggaggtggtggcactgggtatcctggtggtggtcgtgggggtggagctggatggaataac
cgaggtgggggttgggatcgtggtagggaccgggaggtaaacccttttgctaatgatgag
gcggaggaagaacctgaacaggcgtttggggagcaggagaattctggcatcaactttgat
gcttatgaggatattcctgtggagactagcggggatagtgtgccaccccctgtaaataca
tttgcggatatagacctcgggaaggagcttaatgcaaacattaaacgatgcaaatatgtg
aagccgacaccagttcaacgtcatgctatcccaatttcccttgctggacgggatttgatg
gcatgtgctcaaactggttctgggaaaactgcagctttctgctttccaattattagtggt
ataatgaagggtcaagagattcagaaacctcgtggatatagaactgtatatccacttgcc
cttattctttctccaactagggagttgtcagtgcagataaatgaggaagctcgaaagttt
gcatatcaaactggtgtcagggtggtggttgcatatggaggagctccaatcagccaacag
ttgcgtgagcttgaaagaggagtcgatattcttgttgcaacccctggaagactggtagat
ttgcttgagagggctagagtatcacttcaaatgattagatacctggcacttgatgaggct
gatagaatgctggatatggggtttgaacctcagatcagaaagattgttgaacaaactgac
atgccacctcgaggtgtcagacagacgatgctgttcagtgcaaccttcccaaaggagata
cagaggctggcgtctgattttctatccaattacattttcctggctgttggaagggtgggc
tcaagcactgatttgatagttcagagggttgaattcgtgcatgagtccgataagaggagc
catttaatggatcttattcacgctcaaaaagcaaacggagcacatgggaagcaagcattg
acacttgtttttgtggagaccaagaaaggggcagatgcattggagcactggttgggtatg
aatgggtttccagcaactagtatccacggtgatcgaacacagcaggaaagagaacttgca
ctaaggtccttcaaaagtgggaatactcctattctggttgcaactgatgtggcagctcga
ggtctagatattcctcatgttgcacatgtaatcaactttgatctcccgaatgacattgat
gattacgtccatcggataggacgtacaggacgagcgggaaaaagtggattggcaacggcc
tttttcaatgaaaataatatgtccctagctcgaccgatggctgagctgatgcaagaagca
aaccaagaagtacctgattggctggttcgttatgcgtcacgtgcatcttatggtggagga
agaaacaggagaactgggggtggccgcttcggaggccgtgactttaggagagatggtggc
ggcttcaacaacagaggtggcggaggcaatgattactatggtggaagcaacagtggcggc
gggggatactatggaggtggtggtggtggtggagggggaggtgtagttggtggaggtggc
tataatccaggtgcgtctagtgcctgggattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system