KEGG   Barnesiella viscericola: BARVI_03295
Entry
BARVI_03295       CDS       T02986                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bvs  Barnesiella viscericola
Pathway
bvs03030  DNA replication
bvs03430  Mismatch repair
bvs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BARVI_03295
   03430 Mismatch repair
    BARVI_03295
   03440 Homologous recombination
    BARVI_03295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvs03032]
    BARVI_03295
   03400 DNA repair and recombination proteins [BR:bvs03400]
    BARVI_03295
Enzymes [BR:bvs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BARVI_03295
DNA replication proteins [BR:bvs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BARVI_03295
DNA repair and recombination proteins [BR:bvs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BARVI_03295
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 QSregVF_b Colicin_D
Other DBs
NCBI-ProteinID: AHF12006
UniProt: W0ESA6
Position
complement(802113..802913)
AA seq 266 aa
MQLNLKNPLVFFDLETTGTNITTDRIIELAYVKVFPNGEVEEKDIFVNPGMPIPPASTAV
HHITDEMVADKPLFKDVARNIAKVFEGCDIAGFNSNRFDVPFLIEELLRAGVNLDISKRK
FVDVQTIYHIMEPRTLKAAYKFYCGAPLVDAHSALADTRATYEVFKAQLDRYTEAAKDEY
EGKYLTNDIDSWVSFSTQNRNVDFAGRIILNEHDVPVFNFGKYKGRSVEEIFQLEPSYYS
WMMQGDFPLNTKNVITEIYTRARRRF
NT seq 801 nt   +upstreamnt  +downstreamnt
atgcagctgaatttgaagaacccactcgttttcttcgatttggagacgacgggtaccaat
atcaccaccgaccggattatcgaactggcctatgtcaaggtcttccccaacggcgaggtg
gaggagaaagatatctttgtcaatcccggtatgcccataccccccgcatcgacggccgtg
caccacattaccgacgagatggtggccgacaagcccctcttcaaggacgtggcccgcaac
atcgccaaggtgttcgaggggtgcgatattgccggattcaattccaaccgtttcgatgtg
ccgttcctcatcgaggagttgttgcgcgccggggtcaatctcgacatctcgaagcgcaag
tttgtcgacgtgcagaccatctaccacatcatggagccccgtaccctcaaagccgcctac
aagttctattgcggcgcgccgctggtcgatgcccactcggctctggccgatacccgggct
acctacgaggtattcaaggcccaactcgaccgctataccgaggctgccaaagatgagtat
gaagggaaatacctcaccaacgacatcgactcgtgggtgtcgttctcgacccagaaccgc
aacgtcgattttgccgggcgcatcattctcaacgaacacgatgtgccggtgttcaacttc
ggcaaatacaaggggcgttcggtcgaggagatattccagctcgaacccagctattacagc
tggatgatgcagggcgacttcccgctgaataccaagaatgtcataaccgagatatacacc
cgcgcacgccgccgcttctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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