KEGG   Phocaeicola vulgatus: BVU_3409
Entry
BVU_3409          CDS       T00546                                 
Name
(GenBank) ATP-dependent exonuclease V, alpha subunit - helicase superfamily I member
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bvu  Phocaeicola vulgatus
Pathway
bvu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BVU_3409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bvu03400]
    BVU_3409
Enzymes [BR:bvu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BVU_3409
DNA repair and recombination proteins [BR:bvu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BVU_3409
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 HHH_5 AAA_11 Viral_helicase1 Helicase_RecD DEAD PIF1 HHH HHH_2 MeaB AAA_28 nSTAND3 CbiA UvrD-helicase NTPase_1 TsaE T2SSE TrwB_AAD_bind AAA_22 PhoH AAA UvrD_C DUF5610 Fer4_NifH AAA_31 ResIII AAA_16 SRP54
Other DBs
NCBI-ProteinID: ABR41035
UniProt: A6L5S1
Position
complement(4249215..4251476)
AA seq 753 aa
MLKLRCVVERITYQNPENGYSVMRVKVKSYDDLVTLVGNLLEVPAGSVLLCEGEWKVDKR
YGSQFVCQSWEEVMPATVYGIEKYLGSGLVKGIGPKFAQLIVRQFGLETIDVIETDIERL
YEVPGIGKKRVEKICESWEKQKDIKNVMLFLQGYGVSTAYAAKIYRQYGKESIDKVKENP
YRLADDIWGIGFKTADSIAAKMGYEKNDLRRCKSGIIYTLNQLANEGHVYAEEEQLVQAA
LELLEADEAPIREALNNMVQTDDLKLEDEAIYLPPFYFAEVGTTNRLQALLRESEQNLFA
KKVDVQALSKETGIEYDEVQLQAIEEAIRSKVMVLTGGPGTGKTTTTQGIIAALKHMGLR
ILLAAPTGRAAKRMSEATGMESKTIHRLLEFNPKDGYKRNDENPLEGDALIVDECSMIDI
ILMNNLMKAIPSSMRVVFVGDIDQLPSVGAGNVLRDIIESEKIPVIRLTRIFRQAQTSRI
VMSAHAINQGRFPDTSNGKQTDFFFIQQEEPEKVAEEIVNLVKNRLPKAYSQGVSNIQVL
TPMQRGVVGAANLNMALQNALNPSQIALNRGGYSFRQGDRVMQLRNNYDKDVFNGDLGYV
ESVDMEERTLLVNFEERQVEYEASELDELTLAYATTIHKSQGSEYPIVVMPVLMTHYVML
QRNLVYTGITRAKKICVLIGTKKALSFAIRNMSVLKRNTKLKERLNPELAKPTEKKPVEK
KLSKIYPMNEPVLEAAAEPSESYGKKQPTIETK
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgctcaaacttcgctgcgtagtagaaagaatcacctaccaaaatcccgagaacgggtat
tcggtgatgagggtcaaggtcaaaagctatgacgacctggtgacactggtgggcaacctg
ctggaggtgcctgccggaagtgtgctgttatgtgagggcgaatggaaggtggacaaacgc
tacggcagccagttcgtgtgccaatcgtgggaggaggtgatgccggccacggtctatggc
attgagaagtatctgggaagcggactggtaaaaggcatcggtccgaagtttgcccaactc
atcgtccgtcagtttggtctggaaaccatcgatgtgatcgagaccgacatcgaacggctc
tacgaggtgccgggcatcggcaagaagcgcgtggagaagatttgcgagagttgggagaag
cagaaggacatcaagaatgtgatgcttttcctgcaggggtatggtgtcagtacggcctat
gcggccaagatttaccgccagtacggcaaggaaagcatcgacaaggtaaaggagaaccct
taccgactggctgacgacatctggggcatcggcttcaagacggccgacagcattgcagcg
aagatgggctacgaaaaaaatgacctccgccgctgtaagagtggcatcatctacaccttg
aatcagttggccaacgaagggcatgtctatgctgaagaggaacagttggtacaagctgcg
ttggaattgctggaagcggacgaagcgcctatccgtgaggctttgaataatatggtgcag
acggatgacttgaagttggaagacgaagccatctatctgccgcctttctactttgccgaa
gtaggtacgacgaacaggctgcaggctttgctccgtgaatcggaacagaacctctttgcc
aagaaggtagatgtgcaggctttatcaaaggaaactggcattgaatatgacgaggtgcag
ctgcaggccatcgaggaagccatccgttcaaaagtaatggtactgacggggggaccgggt
acgggtaagactaccaccacgcagggtatcattgcggctttgaagcatatgggacttcgc
attctgctggcggctcctacgggacgggcagccaaacgtatgagtgaagccaccgggatg
gagtccaagaccattcaccggctgctggagttcaatccgaaagacggctacaagcggaat
gatgagaatcccttggaaggggacgcactgattgtggacgagtgttcgatgattgacatc
atcctgatgaacaacctgatgaaggccattccctcttccatgcgcgtggtcttcgtgggc
gacattgaccagttgccgagtgttggtgccggcaatgtgttgcgcgacatcattgagagt
gaaaagattccggtgattcgactgacccgtattttccgtcaggcgcagaccagccgcatt
gtgatgagtgcccatgccatcaaccagggacgtttccccgatacgagcaacggcaagcag
acggatttctttttcatccaacaggaggagccggagaaggtggcggaggaaattgtgaat
ctggtgaagaaccgcctgccgaaagcctacagccaaggggtgagcaacattcaggttttg
acccccatgcaacgcggtgtggtgggtgctgccaatctgaacatggccttgcaaaatgca
ctgaatccttcccagattgccttgaacaggggaggttattccttccgtcagggcgaccgg
gtgatgcagctgcgcaacaactacgacaaggatgtgttcaacggggacctcggctatgtg
gaatcggtagatatggaggaacgtacgctgctggtgaactttgaggagcgtcaggtggaa
tacgaagcctcagaactggatgagttgacactggcctacgctacgaccattcacaagtcg
caaggatcggaatatcccatcgtggtgatgccagttcttatgacacactatgtaatgctg
cagcgtaacctggtttatacgggcatcacccgtgccaagaagatttgcgtgctcatcggt
accaaaaaggcgctttcatttgccatccgcaacatgtcggtgttgaaacggaacacgaaa
ctgaaggagcgactgaatccggaattggcaaaacccacggagaagaagcctgtagagaag
aagttgagcaaaatttatccgatgaacgaacctgttttggaagctgccgccgaacccagc
gaaagttacggaaagaaacaacctaccattgaaacgaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (244)   
   KEGG ORTHOLOGY (1)   
   RefGene (241)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (283)   

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