KEGG T00340: Bxe

Burkholderia xenovorans: Bxe_A2328

Entry

Bxe_A2328 CDS T00340

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bxe Burkholderia xenovorans

Pathway

bxe03410	Base excision repair
bxe03420	Nucleotide excision repair
bxe03430	Mismatch repair
bxe03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bxe03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bxe03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bxe03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bxe03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:2334491..2337496

AA seq 1001 aa
MNDRLDTYNRKRRFDDTPEPAGTRTSRKQGGRKTAGQASPEALSYVIQEHDARRLHYDFR
LELNGTLLSWAVPKGPSLDPSVKRLAVHVEDHPVEYGSFEGEIPLGNYGAGSVIVWDRGT
WEPLGGAAEAARAYAAGKLKFQLHGEKLHGGWTLVRSHMRGSGDKEQWLLIKERDDEARD
ESKYDILKKRPGSVLADSAAAVKGAKTAKTAAAKSTAKTASKAAVATATKATADPDSASL
AKRTGRNGAQKASSSRADPKRPDIVATRSAQSLRDLAASPSIEGAVPARLPATFKPQLAT
LVDGAPPGNEWSYEIKFDGYRVLVRIDRATKGSAVKVLTRAGNDWTAKFSKQVKAFEQLD
IESAWLDGEAVVLNQNGVPNFQALQNAFDSNRPQDIVIYLFDIPFLNGYDLRGVPLEQRR
AILRALLEDADDSVLRFSNNFEFSADDLLRSACDMALEGIIGKRRDSGYMSGRSSAWIKL
KCRRRQEFVIGGYSEPSGSRAAFGALLLGVYDGNGKLQYAGRVGTGFDAALLRSVKKELD
AHETRHMPFAAAPRERSRTPVHWVEPVLVAECNFAEWTSDGIVRQASFVSLRSDKPARQI
VKETPRQGADVQQQTDSVSNDAPTKRAARKTSASAATTSGEGKTRVAKSKTADAKDASTK
SRGVEASGAKGSAAKAAATKPTAATAKAAKATKTSAAKANTTSAPGEVAGVRVSHPDRVI
DRSTGTRKIDLVRYYESVADWMLPHLRDRPVSLVRAPEDIDGELFFQKHSQKLSIPNVTQ
HPGLDPGHPPLITVDTLKALVGAAQMGTVEFHTWNAVVSNIEKPDRMVFDLDPDASLGWE
RMIEAAQLTRSLLEELGLASFCKTSGGKGFHVVVPLAKQAGWDEVKDFSQAVAQHMAATL
PRYFSAKMGAQNRKQKIFVDYLRNNRGSSTVAAFSARARPGLGVSVPLAWDEVATTTGGA
QWTIENLHERLADLKSDPWADYAKTRQRITAAMKKRLDDAQ

NT seq 3006 nt +upstreamnt +downstreamnt
atgaacgacagactcgacacctacaaccgcaaacgccgcttcgacgacacgccggaacct
gcgggcacgcgcacgagtcgcaagcagggcggccggaagacggccgggcaggcgtccccg
gaggcgctgtcgtacgtgattcaggagcacgacgcgcgtcgtttgcactacgacttccgg
ctcgaactgaacggcacgctcctgtcctgggcggtgccgaaagggccgagcctcgacccg
tcagtaaagcggctggcggtgcatgtcgaagaccatccggtcgaatacggttcgttcgaa
ggcgaaattccgctgggcaattacggcgcgggcagtgtgatcgtgtgggatcgcggcaca
tgggagccgctcggcggcgcggccgaggcggcgcgcgcttacgcggccggcaagctcaag
ttccagttgcacggcgagaagctgcacggcggctggacgctggtgcgcagccatatgcgc
ggcagcggcgacaaggaacagtggctgctcatcaaggaacgcgacgacgaagcgcgcgac
gaaagcaagtacgacattctgaagaagcgtccgggcagcgtgctcgccgatagcgctgcg
gcagtcaaaggcgcaaaaactgcaaagacggcggccgcgaagagcacagcaaaaactgca
agcaaagcggccgtggccacggccacgaaagccactgcggatcctgactcggcgtcgctc
gcaaaacgaaccggcaggaacggcgcgcagaaagcttcatccagccgcgcggacccgaag
cgacccgacatcgtcgccacgcgcagcgcgcaatcgctgcgcgacctcgccgcttcgccg
tcgatcgagggcgcggtgccggcacgcttgcccgcgaccttcaagccgcaactggcgacg
ctcgtcgacggcgcgcctcccggcaatgaatggtcgtacgaaatcaagttcgacggctat
cgtgtgctggtccgaatcgatagggcgaccaagggaagcgcggtcaaggtgctcacccgc
gccggcaacgactggaccgcgaagttcagcaaacaggtcaaggcgttcgaacaactcgac
atcgaaagtgcatggctcgacggcgaggccgtcgtgctgaaccagaacggcgtgccgaat
tttcaggcgctgcaaaacgcgttcgattcgaaccgcccgcaagacattgtgatttacctg
ttcgacataccgtttctgaacggctacgacttgcgcggcgtgccgctcgaacaacgccgc
gcgattctgcgcgcgttgctcgaagacgccgacgacagcgtgctgcgcttctcgaacaat
ttcgagttcagcgcggatgacctcctcaggagcgcgtgcgacatggcgctggaaggcatc
atcggcaagcggcgcgacagcggctatatgtcgggacgttcgtcggcgtggatcaaactg
aagtgccgccgacgccaggagttcgtgataggcggctactcggaaccgtccggcagccgc
gcggcgttcggtgcgctgctgctcggcgtctatgacggcaacggcaagttgcagtatgca
gggcgcgtgggcaccggtttcgacgcggcgctgctgcgctcggtgaagaaagaactcgat
gcgcacgagacccggcacatgccgttcgccgccgcgccgcgcgaacgcagccgcacgccg
gtgcattgggtcgaaccggtgctggtcgccgaatgcaatttcgcggaatggacgagcgac
ggcatcgtgcggcaggcgtcgttcgtgagtctgcgcagcgacaagccggcgcgccagatc
gtcaaggaaacacctcgacagggagccgacgtgcaacagcaaaccgattctgtgtctaac
gacgcgccgaccaaacgtgccgcgcgcaagacttccgccagtgcggcgacaacgtccggc
gaggggaaaactcgcgtggcgaaatcgaagactgcggatgcgaaagacgccagtacaaag
agccgtggagtagaggcaagcggtgcgaaaggcagcgctgcgaaagccgctgcaaccaaa
ccaacggcagcgacagccaaagcagcgaaagcgacgaaaacctcagccgcaaaagcaaac
accacctcagcccccggcgaagtcgccggcgtccgcgtctcccatcccgaccgcgtcatc
gacaggagcacgggcacgcgcaagatcgatctcgtgcggtactacgaatcggtggccgac
tggatgctgccgcatctgcgggaccgcccggtttcgctggtgcgcgcccccgaggacatc
gacggcgagctgtttttccagaagcacagccagaagctgtcgattccgaatgtcacccag
catccggggctcgatccggggcatccgccgctgattaccgtcgatacgctcaaggcgctg
gtcggcgccgcgcaaatgggcaccgtcgaatttcacacgtggaatgccgttgtgtcgaac
atcgaaaagccggaccgcatggtgttcgacctcgacccggatgcctcgctgggttgggag
cgcatgatcgaagccgcgcaattgacgcgttcgctgctcgaagaactcggtctcgcgtcg
ttctgcaagacgagcggcggcaagggatttcacgtggtcgtgccgctcgcgaagcaggcc
ggctgggacgaagtgaaggacttttctcaagccgtcgcgcagcacatggcggcgacgctg
cccaggtacttcagcgcgaagatgggcgcgcagaatcgcaagcagaaaattttcgtcgac
tacctgcgcaacaaccgcggatcgagcacggtcgccgcattttccgcgcgcgcgcggccg
ggcctgggcgtatcggtgccgctggcctgggacgaagtcgccaccacgacgggcggcgct
cagtggaccatcgagaatctgcacgaacgcctcgccgacctgaaaagcgacccgtgggcg
gactatgcgaaaacgcgccagcgcattaccgctgccatgaaaaaacgcctggacgacgcg
cagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BXE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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