KEGG T00340: Bxe

Paraburkholderia xenovorans LB400: Bxe_A2348

Entry

Bxe_A2348         CDS       T00340

Name

(GenBank) 23S rRNA m(5)U-1939 methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

bxe Paraburkholderia xenovorans LB400

Brite

KEGG Orthology (KO) [BR:bxe00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bxe03009]
    Bxe_A2348
Enzymes [BR:bxe01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Bxe_A2348
Ribosome biogenesis [BR:bxe03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Bxe_A2348

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 RrnaAD Met_10 Methyltransf_23 Methyltransf_15 Cons_hypoth95 MTS Methyltransf_11

Other DBs

NCBI-ProteinID:

ABE30622

UniProt:

Q13Z67

Position

1:2311995..2313299

AA seq 434 aa
MEARGVGRTETEDGTPGKVIFVEGVLPGERVSYSTHRSKPKFEQAEVVQVLRESVMRTKP
KCTYFDICGGCSMQHLDIRAQVAVKQRVLEDNLQHLAKLRPETVFRPIHGPSWGYRYRAR
LAVRFLPEKGGMRIGFHEKKSSYIADMKTCEVLPPHVSAMLMPLRFMVRKLSIYDRMPQL
ELAVGSSVTALVVRNLEPITAADEQVLRDFADEHKVQFWLQPGGPDTVTPFYPLDVQLDY
TLPEYGIRMPFKPTDFTQVNHAINRVLVSRALRLLAPARTDRVLDLFCGIGNFTLPLARI
SKEVMGIEGSEVLTSRALANAGLNGVAGHTSFECRNLFEVTADDLRALGHFDKFLIDPPR
EGALAVAKALAEIARSGNGPLPKRIVYVSCAPATLARDAGLLVHEAGYRLVGAGVVNMFP
HTSHVESIALFERD

NT seq 1305 nt +upstreamnt +downstreamnt
atggaagcgcgcggcgtcggccgcaccgagaccgaagacggcacacccggcaaggtgatc
ttcgtcgaaggtgtgctgcccggtgaacgcgtgagttattcgacgcatcgcagcaagccg
aaattcgagcaggccgaagtggtgcaggtattgcgcgaaagcgtgatgcgcaccaagccg
aagtgcacttacttcgatatctgcggcggctgttcgatgcagcatctggacattcgcgcg
caggtagcggtcaagcagcgcgtgctcgaagacaacctccagcatctggcgaagctgcgc
ccggaaacggtgttccggccgattcacgggccctcctggggttatcgctaccgcgcgcgt
ctggccgtgcgtttcctgccggaaaagggcggtatgcggatcggcttccacgagaagaag
agcagctacatcgccgacatgaagacctgcgaagtgctgccgccgcatgtgtcggccatg
ctgatgccgctgcgcttcatggtccgcaagctgtcgatttacgaccgtatgccgcagctc
gaactggcggtcggatcatcggtgacggcgctggtggtgcgtaatctcgaacccatcact
gcggccgacgagcaggtgctgcgcgatttcgccgacgagcacaaggtgcagttctggctg
cagccgggcggcccggatacggtcacgccgttctatccgctcgacgtgcagctcgactac
acgttgccggagtacggcatccgcatgccgttcaaaccaaccgatttcacccaggtgaat
cacgccatcaaccgcgtgctggtgagccgcgcgctgcggctgctggcgccggcgcgtacc
gatcgcgtgctcgatctgttctgcgggatcggcaacttcactttgccgctcgcgcgaatc
tcgaaagaagtgatgggtatcgaaggcagcgaggtgctgacttcgcgtgcgctcgccaat
gccggattgaatggcgtggcggggcatacgtcgtttgaatgccgcaacctgttcgaagtc
accgccgacgacctgcgcgcgctcggccactttgacaagttcctcatcgacccgccgcgc
gaaggcgcgctggccgtcgccaaggcgctcgcggaaattgcccgcagcggcaatggcccg
ctgccgaagcgcatcgtctacgtgtcatgcgcgccggcgacgctcgctcgcgacgccggt
ctgctcgtgcatgaggccggctatcgcctcgtgggtgcgggcgtggtgaacatgttcccg
cacacgtcgcatgtggagtcgatcgcgttgttcgagcgggactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system