KEGG T01836: BAXH7

Bacillus amyloliquefaciens XH7: BAXH7_03487

Entry

BAXH7_03487       CDS       T01836

Symbol

rnr

Name

(GenBank) ribonuclease R

K12573

ribonuclease R [EC:3.1.13.1]

Organism

bxh Bacillus amyloliquefaciens XH7

Pathway

bxh03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:bxh00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAXH7_03487 (rnr)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bxh03019]
    BAXH7_03487 (rnr)
   03016 Transfer RNA biogenesis [BR:bxh03016]
    BAXH7_03487 (rnr)
Enzymes [BR:bxh01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BAXH7_03487 (rnr)
Messenger RNA biogenesis [BR:bxh03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BAXH7_03487 (rnr)
Transfer RNA biogenesis [BR:bxh03016]
Prokaryotic type
  tRNA degradation factors
   BAXH7_03487 (rnr)

SSDB

Motif

Pfam:

RNB CSD2 OB_RNB S1 OB_Dis3 TFIIE_beta CSN8_PSD8_EIF3K

Other DBs

NCBI-ProteinID:

AEK90601

Position

complement(3241182..3243515)

AA seq 777 aa
MEKEAFMDRLLSFMKEEAYKPLTVQELEEMLNITEAEEFKELVKALVALEETGQIVRTRS
NRYGLPEKMNLVKGKISAHAKGFAFLLPEDTSLSDVFIPPNELNTAMNGDIVMVRLNSQS
SGSRQEGTVIRILERSIDRVVGTYTETKSFGFVIPDDKKITSDIFIPKHANNGAAEGHKV
VVKLTSYPEGRMNAEGEIVEILGHKNDPGIDILSIIHKHGLPGDFPAEAMEQATSTPDTI
DEKDIKDRRDLRDQVIVTIDGADAKDLDDAVTVTKLDNGSYKLGVHIADVSHYVTENSPI
DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINQQGQVTEHEIFQ
SVIKTTERMTYSDVNRILTEDDAELKERYEPLVPMFKDMERLAEILRAKRMNRGAVDFDF
KEAKVLVDEEGAVKDVVIRERSVAEKLIEEFMLVANETVAEHFHWMNVPFIYRIHEEPNA
EKLQKFLEFVTTFGYIVKGTAGDIHPRALQSILDEVRDRPEETVISTVMLRSMKQAKYDP
QSLGHFGLATEFYTHFTSPIRRYPDLIVHRLIRTYLINGQSDEATQEKWAERLPEIADHT
STMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNTIEGLVHVSFM
TDDYYRFDEQHFAMIGERTGNVYRIGDEITVKVVDVNKDERNIDFEIVGMKGTRRPRETT
GDRRKRGRPARKRVLNSNTPASPPKSEEKGEWFTKPKKKKKKRGFQNAPKQKRKKKK

NT seq 2334 nt +upstreamnt +downstreamnt
atggaaaaagaagcgtttatggaccgtcttctctcgttcatgaaggaagaggcgtacaag
ccccttaccgttcaggaacttgaggagatgctgaacatcacggaagccgaagaatttaaa
gagctggtaaaagcgctggtggcgctcgaggagacgggtcagatcgtccgcaccagaagc
aaccgctacgggcttccggaaaaaatgaatttagtaaaaggaaaaatttccgcgcatgcc
aagggcttcgcgtttctgctgccggaagatacctcattaagcgacgtgtttattccgccg
aatgagctgaatacggccatgaacggcgatatcgtcatggtgcggctcaactcccagtca
agcggatcgagacaggaaggcactgtcatccgaattctggaaagaagcatagaccgcgtc
gtgggcacatacacagaaacgaaaagcttcggctttgtcattccggatgataaaaaaatc
acgagcgatatttttattccgaaacatgccaataacggcgctgcggaaggccataaagtc
gtcgtgaaactgacaagctatcctgaaggcagaatgaacgccgaaggagaaatcgttgaa
atactcggccataaaaatgacccgggcattgatattttatcaatcatccataagcacggc
ctgccgggagactttccggccgaagcgatggagcaggcaacaagtacgcccgacaccatc
gatgaaaaagacataaaagaccgccgtgatctccgtgatcaggtcattgtcaccattgac
ggcgcggatgcgaaggatctcgatgacgccgtcaccgtgacaaagcttgataacggcagc
tacaagctcggcgtccatattgccgacgtcagccattacgtcacggagaattccccgatt
gataaagaagcgctggaaagagggacaagcgtgtacttggtagaccgggtcatcccgatg
atcccgcacaggctgtctaacggaatctgttctttaaatccgaaggtcgaccgcctgacg
ctttcctgcgaaatgacaatcaaccagcagggacaggtgacggagcacgagatcttccaa
agcgtcatcaaaacgacggaaagaatgacctattcagatgtcaaccgaatcctcacagaa
gacgacgctgagctgaaagaaagatatgagccgctcgtcccgatgtttaaagacatggaa
cgcctggcggaaattctccgggcgaaacggatgaaccgcggcgccgtggattttgatttt
aaagaagcgaaggtgctcgtcgatgaggaaggcgccgtaaaggacgtcgtcatcagagaa
cgctcagtagccgaaaagctgattgaggaattcatgcttgtcgcaaacgaaacggtggcc
gaacacttccattggatgaacgtgccgtttatttaccggattcacgaagagccgaacgct
gaaaaactgcaaaagttcctggagttcgtcacgacattcggttatatcgtcaaagggaca
gccggagacattcatccgcgcgcattgcaaagcattcttgacgaagtccgggaccgtccg
gaagaaacagtgatctcaacagtcatgctccgttccatgaagcaggcgaaatacgacccg
caaagcttgggccatttcgggctggcgactgaattttatacacacttcacatcgccgatc
cgccgttatcctgacttaatcgttcacagactgatcagaacgtatttgatcaacggacaa
tcggacgaagcaactcaagaaaaatgggccgaacgcctcccggaaatcgctgaccatacg
tcaacgatggaacggcgcgccgttgacgcagagcgggaaacggacgatctgaaaaaagcg
gaatatatgcttgataaaatcggcgaggagtttgacggcatgatcagttccgtcacgaat
ttcggaatgttcgtcgagctgccgaatacgattgaagggcttgtgcacgtcagctttatg
acggatgattattaccgttttgatgaacagcatttcgccatgatcggcgaacgcacgggc
aacgtttaccggatcggggatgaaatcacggtcaaggtcgtggacgtcaataaagatgag
agaaacatcgactttgaaattgtcggcatgaaaggcacccgccgtccgagagaaacaaca
ggcgaccgcagaaaacgcggcagaccggcgcggaaacgtgtattaaacagcaataccccg
gcttcaccgccgaaatcggaggaaaaaggggaatggtttacaaaaccgaagaagaaaaag
aaaaaacgcggtttccaaaacgcgccgaaacaaaaacgcaaaaagaagaagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system