KEGG   Bacteroides xylanisolvens: BXY_18590
Entry
BXY_18590         CDS       T02579                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bxy  Bacteroides xylanisolvens
Pathway
bxy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bxy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BXY_18590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bxy03021]
    BXY_18590
   03400 DNA repair and recombination proteins [BR:bxy03400]
    BXY_18590
Enzymes [BR:bxy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BXY_18590
Transcription machinery [BR:bxy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BXY_18590
DNA repair and recombination proteins [BR:bxy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BXY_18590
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CBK66958
UniProt: D6CXQ6
Position
complement(2184362..2188174)
AA seq 1270 aa
MSSNTVNQRVNFASTKNPLEYPDFLEVQLKSFQDFLQLDTPPEKRKNEGLYKVFAENFPI
ADTRNNFVLEFLDYYIDPPRYTIDDCIERGLTYSVPLKAKLKLYCTDPDHEDFDTVIQDV
FLGPIPYMTDKATFVINGAERVVVSQLHRSPGVFFGQSVHANGTKLYSARIIPFKGSWIE
FATDINNVMYAYIDRKKKLPVTTLLRAIGFENDKDILEIFDLAEDVKVNKTNLKKVLGRK
LAARVLKTWIEDFVDEDTGEVVSIERNEVIIDRETVLEEEHIDEILESGVQNILLHKDEP
NQSDFSIIYNTLQKDPSNSEKEAVLYIYRQLRNADPADDASAREVINNLFFSEKRYDLGD
VGRYRINKKLNLTTDMDVRVLTKEDIIEIIKYLIELINSKADVDDIDHLSNRRVRTVGEQ
LSNQFAVGLARMSRTIRERMNVRDNEVFTPIDLINAKTISSVINSFFGTNALSQFMDQTN
PLAEITHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVFA
KINELGFIETPYRKVENGKVDLSDNGLIYLTAEEEEEKVIAQGNAPLNDDGTFVLNRVKS
RQDADFPVVEPSEVDLMDVAPQQIASIAASLIPFLEHDDANRALMGSNMMRQAVPLLRSE
APIVGTGIERQLVRDSRTQITAEGDGVVDYVDATTIRILYDRTEDEEFVSFEPALKEYRI
PKFRKTNQNMTIDLRPICDKGQRVKKGDILTEGYSTEKGELALGKNLLVAYMPWKGYNYE
DAIVLNERVVREDLLTSVHVEEYSLEVRETKRGMEELTSDIPNVSEEATKDLDENGIVRI
GARIEPGDIMIGKITPKGESDPSPEEKLLRAIFGDKAGDVKDASLKASPSLKGVVIDKKL
FSRVIKNRSSKLADKALLPKIDDEFESKVADLKRILVKKLMTLTEGKVSQGVKDYLGAEV
IAKGSKFSASDFDSLDFTSIQLSNWTSDDHINGMIRDLVMNFIKKYKELDAELKRKKFAI
TIGDELPAGIIQMAKVYIAKKRKIGVGDKMAGRHGNKGIVSRVVRQEDMPFLADGTPVDI
VLNPLGVPSRMNIGQIFEAVLGRAGKTLGVKFATPIFDGATMEDLDQWTDKAGLPRYCKT
YLCDGGTGEQFDQAATVGVTYMLKLGHMVEDKMHARSIGPYSLITQQPLGGKAQFGGQRF
GEMEVWALEGFGAAHILQEILTIKSDDVVGRSKAYEAIVKGEPMPQPGIPESLNVLLHEL
RGLGLSINLE
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgtcttcaaatactgtaaatcaaagagttaattttgcttcgactaagaatccgctagaa
tacccggatttcctggaagtacaattgaagtcattccaagactttctacaattagatacc
ccacctgaaaagcgtaagaatgagggattgtataaagtatttgctgaaaacttccctatt
gccgatacaagaaacaattttgttcttgagtttctggactattatattgatccgccgcgt
tataccattgatgattgtatagagcgtgggcttacttatagtgttcccttaaaagcgaaa
cttaagctttactgtacggaccccgatcatgaggattttgatacagtgattcaggacgta
ttcctcggcccgattccttatatgactgataaggctactttcgtcattaacggtgctgaa
cgcgtagttgtgtcacagcttcaccgttctccgggtgtgttcttcggtcagagtgtacat
gccaatggtacgaaactttattcggctcgtattattccgtttaagggttcgtggattgag
tttgctactgacatcaataatgtgatgtacgcatacatcgaccgtaagaagaaattgccg
gtgactacattgttgcgtgcaattggcttcgagaatgacaaagatattcttgagattttc
gatcttgcagaagatgtgaaggtaaacaagacaaatctgaagaaggtgttaggccgtaaa
ctggctgcacgtgtcttgaaaacatggattgaagatttcgttgatgaagataccggtgaa
gtggtttctattgaacgtaacgaagttattatcgaccgtgaaaccgtactggaagaggag
catattgatgaaattttggagtcgggagttcagaacatccttttgcataaggatgaaccg
aatcagtccgatttctctatcatatataatacgttgcagaaggacccgagtaactcggaa
aaagaagctgtgttgtatatctaccgtcagttgcgtaatgccgatccggctgatgacgca
agtgcaagggaggttatcaacaacttgttcttctcagaaaaacgatatgaccttggtgat
gtaggccgttacagaatcaacaaaaagttgaatctgacgactgatatggacgtgcgtgtc
ctcacgaaggaagatattattgaaatcatcaaatatctgattgagttgattaactcaaaa
gcagatgtggatgatattgaccacttgagtaaccgtcgtgtacgtactgttggtgaacag
ctttctaatcagtttgctgtggggctggcacgtatgtctcgtacgattcgtgaacgtatg
aacgttcgtgacaatgaagtgtttactccgattgatttgattaatgcgaagactatttct
tcagtaatcaactcattcttcggaacgaacgcgttgtcgcagttcatggaccagacaaac
ccgctggctgaaattacgcacaaacgtcgtatgtctgcccttggtcctggtggtctttcc
cgtgaacgtgccggatttgaggttcgtgacgttcactatacacactatggtcgtctttgt
ccgattgagactcctgaaggtccgaacatcggtttgatttcttcattgtgtgtatttgct
aagattaatgagctaggattcattgaaactccctaccgcaaggtggaaaatggaaaagtg
gatctttctgataacggtctgatttatctgactgctgaagaagaggaagaaaaggttatt
gcgcagggaaatgctccgttgaatgacgatggtacattcgtacttaacagagttaagtct
cgtcaagatgcagatttcccggttgttgaaccatctgaagttgacttgatggacgttgct
cctcagcagattgcatctattgcagcttctttgattccattcttggaacatgacgatgct
aaccgtgcattgatgggatcgaacatgatgcgccaggcggttcctttgttgagaagtgaa
gctccgatcgtaggtacaggtatcgaacgtcagttggtaagagactctcgtacccagatt
accgcagaaggcgatggtgtggttgactatgtggatgctactactatccgtattttgtat
gaccgtacggaagacgaagaatttgtaagtttcgaacctgctttgaaggaatatagaata
cctaagttccgtaagactaaccagaacatgacgattgacttacgtccgatttgtgacaaa
ggccagcgtgtgaagaaaggtgatatcttgactgaaggttattctactgaaaagggtgaa
ttggcattgggtaagaacctgctggtagcttatatgccttggaagggttacaactatgag
gatgctatcgtattgaacgaacgtgtggtacgcgaagacttgttgacttcagttcacgta
gaggaatattctctggaagttcgtgaaacaaaacgtggtatggaagagttgacttctgat
atcccgaatgtaagtgaagaagctaccaaagacttggatgaaaatggtatcgtaagaatt
ggtgctcgtatcgagccgggtgatatcatgattggtaagattacgccgaagggtgaatct
gatccttctccggaagaaaaactgcttcgggctatcttcggtgataaggcaggtgacgtg
aaagatgcttctttgaaagcttctccttctttgaaaggtgtggtgattgataagaaactt
ttctcacgtgtgattaagaatcgtagctctaaactggccgataaagcattgttgcctaag
attgatgatgaatttgaatctaaggtagctgacttgaaacgtatcctggttaagaaactg
atgactttgactgaaggtaaggtttctcaaggtgtgaaagactatttgggtgcggaagtt
attgcgaaaggttctaagttcagtgcttctgattttgattcacttgactttacttctatt
caattgagcaactggacaagcgacgatcatattaacggtatgattcgtgatctggtgatg
aatttcattaagaaatataaagagctggatgctgaattgaaacgtaagaagtttgctatt
acaattggtgatgaacttcctgctggtattatccagatggcaaaagtatatattgctaag
aaacgtaagattggtgtgggtgataagatggctggtcgccacggtaacaagggtattgta
tcccgtgttgttcgtcaggaggatatgccgttcttggctgatggtactccggttgacatc
gtgttgaatccgttgggtgtgccttctcgtatgaacattggtcagatttttgaagctgta
ctcggacgtgccggaaaaacgttgggcgtgaaatttgcgactcctattttcgacggtgct
accatggaagatctggatcagtggacagacaaggcaggattgcctcgctactgtaagact
tatctttgtgatggtggtacaggtgagcaatttgaccaggcagctactgtgggcgtaact
tacatgttgaagttgggccacatggttgaagacaagatgcatgctcgttctatcggtccg
tactcattgattactcagcaacctcttggtggtaaagctcaattcggtggtcagcgtttc
ggagaaatggaggtttgggcactcgaaggtttcggtgctgcccatatcttgcaggaaatc
ctgactatcaaatctgatgacgtggtaggacgttcgaaggcttatgaagcaattgtgaaa
ggtgaaccgatgccacaacctggtattccggaatccttgaacgtattgttgcacgagttg
agaggtttaggtttgagtatcaacctagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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