KEGG   Burkholderia sp. YI23: BYI23_B011220
Entry
BYI23_B011220     CDS       T01711                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
byi  Burkholderia sp. YI23
Pathway
byi03030  DNA replication
byi03410  Base excision repair
byi03420  Nucleotide excision repair
byi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:byi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BYI23_B011220
   03410 Base excision repair
    BYI23_B011220
   03420 Nucleotide excision repair
    BYI23_B011220
   03440 Homologous recombination
    BYI23_B011220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:byi03032]
    BYI23_B011220
   03400 DNA repair and recombination proteins [BR:byi03400]
    BYI23_B011220
Enzymes [BR:byi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BYI23_B011220
DNA replication proteins [BR:byi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BYI23_B011220
DNA repair and recombination proteins [BR:byi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BYI23_B011220
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BYI23_B011220
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AET91729
Position
2:complement(1294201..1296939)
AA seq 912 aa
MPEELSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRLRREVNAEY
SACVFDAKGKTFRDDWYAEYKANRPSMPEDLSKQIEPIHVAVRALGWPLVMIERVEADDV
IGTLAVQAEKRGMKVIVSTGDKDLAQLVTDHVTLINTMTNETLDRAGVLTKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAIKWLTQFETLDGIVEHAGEIKGAVGDNLRKALDFLP
MAKKLVTVHTECDLASQIESIEGTLASRPEAREELRDVFLRHGFKTWLREVEIADAVEGP
TDTPPAVVTEIEHHYETVQTWEQFNTWLARIDAAEITSFDSETTSLDPMTAQIVGVSIAT
EPGHAAYIPVAHRGPDAPEQLPRDEVLAKLKPWLEDASKKKVGQHLKYDEQVLANYGIEM
RGVEHDTLLQSYVLESHRPHDMDNLALRHLGVKTIKYEDVAGKGASQIGFDEVPLDKAAA
YAAEDADITLRLHHALYPQVAQEEGLLRVYRDIEMPTSRVLRKMERNGVLIDRERLDTQS
NEIAKRLIDLQAQAYELAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQK
LAEDYPLPKVLLEHRGLSKLKSTYTDKLPRMVNASTGRVHTNYAQAVAVTGRLSSNEPNL
QNIPVRTGEGRRIREAFIASPGSKIVSADYSQIELRIMAHISGDASLMRAFTQGEDVHRA
TASEVFSVTPLEVDNDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYP
GVAAYMENTRTTAKMNGFVETVFGRRLWLPEINGGSGPRRQAAERAAINAPMQGTAADLI
KLSMIAVQDWLEASGTGAKMIMQVHDELVLEVPEEALPEVRKRLPELMCGVAKLKVPLVA
EVGVGNNWEEAH
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgcctgaagaactaagtcttgaaggtaagaccctgctattggtcgacggttctagttac
ttgtaccgggcctaccatgcgatgcccgacctgcgaggccccgacggcggccctaccggc
gcgctgtacggcatgatcaacatgcttcgccgcttgcgccgcgaagtcaatgcagagtat
agcgcgtgcgttttcgacgccaaaggcaagactttccgcgacgactggtacgcggagtac
aaagccaaccggccctcgatgccggaagatctctccaaacagatcgaacccattcacgtc
gccgtgcgcgcgctcggctggccgctcgtgatgatcgaacgcgtcgaagcggacgatgtc
atcggcacgctcgcggtgcaggccgaaaagcgcggcatgaaggtgatcgtgtcgacgggc
gacaaggatctggctcagctcgtgacggatcatgtcaccctcatcaatacgatgaccaac
gaaacgctcgaccgcgccggcgtgctcacgaagttcggcgtgccgccggagcgcatcgtc
gactatctgtcgctcatcggcgatacggtcgacaacgtgccgggcgtcgagaagtgcggc
cccaagaccgcaatcaaatggctcacacaattcgaaacccttgatggcatcgtagaacat
gccggcgagatcaagggtgcggtaggagacaatctgcgcaaggctctggacttcctgccg
atggcgaaaaagctcgtcaccgtgcacacggaatgcgatctcgcttcgcagatcgagtcg
atcgagggcacgcttgcgagccgtcctgaagcgcgcgaggagctgcgcgacgttttcctg
cgtcacggcttcaagacctggctgcgcgaagtcgaaatcgcggacgccgtggaaggtccg
accgacacgccgccagccgttgtcaccgaaatcgagcaccactacgaaaccgttcagacg
tgggagcagttcaatacgtggctcgcgcgcatcgacgcagcggagatcacgtcgttcgat
agcgagaccacgtcgctcgatccgatgaccgcgcagatcgtcggcgtgtcgatcgctacg
gaaccggggcacgcggcttatattcccgtcgcgcatcgcgggccggacgcgcccgagcaa
ttgccgcgcgacgaagtgctcgcgaagctcaagccctggctcgaagatgcatcgaagaag
aaggtcggccagcatctgaagtacgacgagcaggtgcttgcgaactacggcatcgaaatg
cgcggcgtcgagcacgacacgctgctgcaatcgtatgtgctggaatcgcatcgtccgcac
gacatggacaacctcgcgttgcgtcatctcggcgtgaagacgatcaagtacgaggatgtc
gcgggcaagggcgcatcgcagatcggcttcgatgaagtgccgctcgataaagccgcggcc
tacgcggcggaagatgcggatatcacgctgcgcctgcatcacgcgctctatccgcaagtc
gcgcaggaagaaggcttgctgcgcgtgtatcgcgacatcgaaatgcctacttcgcgcgtg
ttgcgcaagatggaacgcaacggagtcctgatcgatcgcgaaagactcgatacgcaaagc
aacgagatcgccaagcgtctcatcgatttgcaggcgcaggcgtatgaactcgcgggcggc
gaattcaatctcggatcgccgaagcagatcggccagatcttcttcgagaagctcgaattg
ccggtcgtgaagaagacgccgagcggcgcgccttccaccgacgaagaagtgctgcaaaag
ctcgccgaagactatccgctgccgaaggtgctgctcgaacatcgcggactgtcgaagctc
aaatccacctacacggacaagctgccgcgcatggtgaatgcgtcgacgggacgcgtgcat
acgaattacgcgcaagccgtggccgtgacgggacgtttatcgtcgaacgagccgaacctg
caaaatatccccgtgcgcacgggcgaagggcggcgcattcgcgaagcgttcatcgcgtcg
ccgggaagcaagatcgtatcggcggattattcgcagatcgaactgcggatcatggcgcat
atctccggcgacgcatcgctgatgcgcgcgttcacgcaaggcgaggacgtgcaccgcgcg
accgcttcggaagttttcagcgtcacgccgctcgaagtcgacaacgatcagcggcgcatc
gcgaaggtcatcaatttcggcctgatctacggcatgagttcgttcgggctcgcgtcgaat
ctcggcattacgcgcgatgcggcgaagctctatatcgaccggtacttcgcgcgctatccg
ggcgtcgccgcttatatggaaaacacgcgcacgaccgcgaagatgaatggtttcgtcgaa
accgtgttcggccggcgtctgtggctgcccgagatcaacggcggcagcgggccgcgccgt
caggccgccgagcgcgccgcgatcaacgcgccgatgcagggcaccgcggcggatctcatc
aagctgtcgatgatcgcggtgcaggactggctcgaagcatcgggcaccggcgcgaagatg
atcatgcaggtgcacgacgaactcgtgctcgaagtgcccgaggaagcgcttcccgaggtc
aggaagcgcttacctgaactgatgtgcggcgtcgcgaagctgaaggtgccgctggttgcg
gaagtgggcgtcggcaacaactgggaagaggcgcactga

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