KEGG   Coraliomargarita akajimensis: Caka_0983
Entry
Caka_0983         CDS       T01204                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
caa  Coraliomargarita akajimensis
Pathway
caa00230  Purine metabolism
caa00240  Pyrimidine metabolism
caa01100  Metabolic pathways
caa01232  Nucleotide metabolism
Module
caa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:caa00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Caka_0983
   00240 Pyrimidine metabolism
    Caka_0983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caa03400]
    Caka_0983
Enzymes [BR:caa01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Caka_0983
DNA repair and recombination proteins [BR:caa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Caka_0983
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ADE54005
UniProt: D5ER12
Position
1250387..1253302
AA seq 971 aa
MKDNADKSTTTPKNTGHYLTIDRTFSQADVHPYDEITWTYRTAEITDDKGQAIFKQEAIE
VPEAFSDLATKILSSKYFYGDIDLGTDPNTGGRESSFKQVVDRVAGTITEWGLTDGYFEN
ADQAKVFGEELTWLLVNQYGAFNSPVWFNLGLYHAYGVGKDSCKGNFYWDQDHEVVMRAN
SQYEFPQCSACFIQHVDDNMDSIMELARSEAMLFKFGSGSGTDLSSIRSTREKLSGGGRP
SGPLSFLSVYDAVAGVVKSGGKTRRAAKMNVLKDWHPDIEEFIEAKTIEERKAWALIEEG
YDPSFNGDAYGSIKYQNENLSVRASDTFMQAATTGSKFFTKRVTDGEPCEEKDASYLLDR
ISEGTHVCGDPGMQFDDTIHKWHTCKGSGRQNCTNPCSEYLFLDNTACNLASLNLMKFRT
AEGLDAERFAAAAKIFIIAQEIVVDRSSYPTEAITYNSHWFRTLGLGYANLGALLMSYGY
AYASDEGLGLAKAITATMTGVAYKTSAELAALKTPFPGYKDARHHGVENPPEADNVASMQ
AVIELHKSHAESLASQTARGELAEATAQYAQRVWKEAADLGKRYGYRNAQVTVLAPTGTI
GFLMDCDTTGVEPAIGLVAYKTLAGGGLMTIPIKSIPLAMETMGYDQAAIDQVCAHVKEY
GTVENISVSGKQIQSGLKDEHIPVFDSAFKSGMGQRYLPYTAHIDMMSAVQPFLSGAISK
TVNMPQEATIKEIRETYIHAWKKGIKGIAIYRDGSKRSAPIKTTKDEPKEAKPEVQVTME
PYRRKLPDTRESLTHKFSIGGSEGYITIGKFEDGTPGEVFIQMSKAGSTINGLMDCVGTL
VSLCLQYGVPLETLVKKFSHVRFEPEGMTKNPHIPFAKSVIDYVARELGMEFIPGYKEKM
SPAAQFDDSFEDKNPSATSIEKEAPKLDEQQLELLTQSEGNLTCPECGSGKVKVTGTCAC
CLNCGTSLGCS
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgaaagacaacgctgacaagtccaccaccacccccaaaaacaccggtcactacctgacg
attgaccgtaccttctcgcaagcggacgttcacccctacgacgaaatcacctggacctac
cgcaccgcggaaatcaccgacgacaagggccaggccatcttcaagcaggaggccatcgag
gtcccggaagccttctcggatctcgcgaccaagattctctcctccaaatatttctatggc
gacatcgacctcggcaccgatcccaacaccggcggtcgtgaatcctccttcaaacaggtg
gtcgaccgcgtggccggcaccatcactgagtggggtctgaccgacggctattttgaaaac
gcggaccaggccaaagtctttggcgaggagctcacctggttgctggtcaaccagtacggc
gccttcaactcgccggtctggttcaatctcggcctctaccatgcctacggcgtcggtaag
gactcctgtaagggcaatttttactgggaccaggaccacgaggtggtcatgcgtgccaac
agccagtatgagtttccgcagtgctccgcctgcttcattcagcatgtggatgacaacatg
gactcgatcatggagctcgcgcgctcggaggcgatgctgttcaagtttggttccggctcg
ggcaccgatctctccagtatccgctccacccgcgaaaaactctccggtggtggccgccca
tcgggtccactgtccttcctctcagtctacgacgccgtggccggtgtggtgaagagcggt
ggcaagacccgccgcgcggcgaagatgaacgtgctcaaggactggcaccccgacatcgag
gaattcatcgaggccaagaccatcgaggagcgcaaggcctgggcgctgatcgaggaaggc
tatgatccgtccttcaatggcgacgcctacggctcgatcaaataccagaacgaaaacctc
tcggtgcgcgccagcgatactttcatgcaagcggccaccacgggcagcaagttcttcacc
aagcgcgtcaccgatggcgagccctgcgaggagaaggatgcctcctacctgctcgaccgt
atttcagaaggcacccacgtctgtggtgatccgggcatgcagttcgatgacaccattcac
aagtggcacacctgtaagggctcgggtcggcagaactgcaccaacccctgctcggaatat
ctcttcctcgacaacacggcctgtaatctggcctcgctcaatctgatgaagttccgcaca
gcggagggactggatgccgagcgcttcgcggcggcggcgaagatctttatcatcgcgcag
gaaattgtggtcgatcgctcttcctatcccaccgaggcgattacctacaacagtcactgg
ttccgcacccttggactgggttatgccaacctcggcgcgctgttgatgtcctatggctat
gcttacgcctccgacgagggactgggtcttgccaaggccatcaccgccaccatgaccggt
gtggcctataagacctccgccgaactggccgccctcaagacccccttcccgggctacaag
gatgcccgccaccatggcgtggagaatccgccggaagccgacaacgtggcttcgatgcag
gcagtgatcgaactgcacaagagccacgcggaatcactcgcgagccaaacggcgcggggt
gagctcgccgaagccaccgcacagtatgcgcagcgcgtctggaaggaagccgccgatctc
ggtaagcgctacggctaccgcaacgcacaggtcaccgtgctcgcaccgaccggcaccatc
ggtttcctgatggactgcgacaccaccggggtcgaaccggccatcggtctggttgcctac
aagacgctcgcgggtggtggcctaatgacgattccgatcaagtccatcccgctggcgatg
gaaaccatgggctacgaccaggcagcaatcgatcaggtctgcgcccacgtcaaggaatac
ggcacggtcgaaaacatttctgtatccggaaagcagatacaatccggactcaaggacgag
cacattccggtgttcgattccgccttcaagtccggcatgggacaacggtacctgccctac
actgcgcacatcgacatgatgtctgcagtccaacccttcctctccggtgcgatttccaaa
acggttaacatgccacaggaagccaccatcaaggagatccgtgagacctacatccatgcc
tggaagaaaggtatcaagggcatcgcgatctaccgcgacggctccaagcgctccgcaccg
atcaagaccaccaaggacgagcccaaggaggcaaagccagaggtccaggtcaccatggaa
ccctaccgccgcaagctgcccgacactcgcgagtccctcacccacaagttcagcatcggt
ggctccgaggggtatatcaccattggtaagttcgaggacggcaccccgggcgaggtcttc
attcaaatgtccaaggccggctccaccatcaatggtctgatggactgcgtcggcacgctc
gtctccctctgtctgcaatacggtgtaccgctcgaaaccctggtcaaaaaattcagccac
gtccgcttcgaaccggagggcatgaccaagaacccgcacatcccctttgcgaagtccgtc
atcgactacgtcgcccgcgagctcggtatggagttcatccccggctacaaagaaaagatg
agccccgccgctcagttcgacgacagcttcgaggacaaaaaccccagcgccaccagcatc
gaaaaggaggcaccgaagctcgatgagcaacaactggagctactcacgcagagtgagggc
aatctgacttgccctgagtgcggcagcggcaaagtcaaagtgactggaacctgcgcgtgt
tgcttgaattgtggaacaagtttaggttgttcctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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