KEGG T01204: Caka

Coraliomargarita akajimensis: Caka_1857

Entry

Caka_1857 CDS T01204

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

caa Coraliomargarita akajimensis

Pathway

caa00260	Glycine, serine and threonine metabolism
caa00400	Phenylalanine, tyrosine and tryptophan biosynthesis
caa01100	Metabolic pathways
caa01110	Biosynthesis of secondary metabolites
caa01230	Biosynthesis of amino acids

Module

caa_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:caa00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:caa00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2247517..2248746)

AA seq 409 aa
MQTTRPELEVEPLTLPDARGHFGTYGGMYVPETLMTPLFELTEAYHEAQKDPAFQRELDF
QLREFAGRPTNLYFAERLTEHCGGAKIYLKREDLLHTGAHKINNALGQALLAKRMGKTRI
IAETGAGQHGIATAAMCAKLGFECVIYMGEEDMRRQALNVFRMRLCGAEVRGVSAGQKTL
KEAVNEAMRDWVTNVRNTHYIIGSALGAHPFPMMVRDFHRVIGEECKRQIMEKEGRLPDE
VAACVGGGSNAIGIFFAFLKDLGVRLTGVEAGGREITRGHHAARFAGGRLGVLQGAKTWI
LQDADGQIDLTHSVSAGLDYAAVGPEHAYYKEKGRIDFGYATDAEALQAFQDLCAVEGIV
PALESSHGIAYTMKRAREMGAEQIIIGNLSGRGDKDVQEAARLLAGKEV

NT seq 1230 nt +upstreamnt +downstreamnt
atgcaaacaacacgaccagaacttgaagtcgaaccattgaccctgccggacgcccgtggc
catttcggtacctacgggggaatgtatgtgccggagactctgatgaccccgctcttcgag
ttgactgaggcgtatcatgaggcgcagaaggatccggcgtttcagcgggagcttgatttc
cagttgcgtgaatttgcgggtcgtcccaccaatctctattttgcggagcgtctgacggag
cactgtggtggcgcaaaaatctatttaaagcgagaagacctgctgcataccggtgcgcac
aagatcaataatgcattgggacaagctttgttggcaaagcgcatgggcaagacccgcatt
atcgccgaaaccggagccggacagcacggtatcgcgactgccgcgatgtgtgcgaagttg
ggttttgagtgtgttatttacatgggtgaggaagatatgcgtcgccaagctctcaatgtc
ttccgtatgcgtctttgcggggcggaggtgcggggcgtttctgctggccagaagaccttg
aaggaagcggttaatgaggcgatgcgcgactgggtgaccaatgtgcgtaacacacactac
attattggttccgctctgggcgcccacccgtttccgatgatggtgcgtgattttcaccgt
gtgatcggtgaggagtgtaagcgccagattatggaaaaagaaggtcgtttgcccgatgaa
gtcgctgcttgcgtgggcggggggtcgaatgcaattggtatcttttttgccttcctgaag
gatttgggagtccggctgaccggtgttgaagcgggtggacgtgagattacccgtgggcat
catgcggcacgttttgcaggagggcgcttaggtgttttacaaggggcgaaaacgtggatt
ctgcaggacgcggacggccagattgatttgactcattcggtgtctgcagggttggactat
gcagctgttgggccagagcatgcctactacaaggagaaggggcgtatcgatttcggatat
gccacggatgccgaggctttgcaggcgtttcaggatctctgcgcggttgaggggattgtt
ccggcgctcgagtcttcacatggcattgcgtatacgatgaagcgcgctcgtgagatgggt
gcggagcaaatcattatcggcaacctgagtggtcgcggtgataaggatgttcaagaggct
gcgcgcctactagcagggaaggaagtgtaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CAA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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