KEGG   Caldithrix abyssi: Cabys_3219
Entry
Cabys_3219        CDS       T04549                                 
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
caby  Caldithrix abyssi
Pathway
caby03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cabys_3219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caby03400]
    Cabys_3219
Enzymes [BR:caby01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Cabys_3219
DNA repair and recombination proteins [BR:caby03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Cabys_3219
 Prokaryotic type
     Cabys_3219
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: APF19967
UniProt: H1XQG9
Position
3830811..3831530
AA seq 239 aa
MRLPADWEKLLTPVLDVRAFYNELERFIKQFSQIIPEKEKIFSVFHRVPPHRVCCVLYGE
DPYPRLTSANGVAFWDEEIRSWDDRTAGNSMKNILKALLVARGLATYHTPIAQCREIARA
HGLKSPADLFERWLQNGALLVNVALTFSSNKDKKQHFLFWHEFHQALIQSFASLPEQPYF
ILWGKKAQNLESRILKALNQPERIIKSGHPTFIHQFLNAEQPAYSPFKEIEQKTGFSWL
NT seq 720 nt   +upstreamnt  +downstreamnt
gtgagactgccagcggattgggagaaattgttaacgccggttctggatgtacgcgctttt
tacaatgagttagaacgttttattaagcaattttctcaaattattccagaaaaagaaaaa
atcttcagcgtctttcaccgcgtcccgccgcacagggtttgttgcgtactttacggcgag
gatccttatccgcgcttaaccagcgccaacggcgtggccttctgggatgaagaaatccgt
tcctgggacgatcgaacggccggcaattccatgaaaaacattttaaaagcattactggtg
gctcgcggactggctacttaccacacgccaattgcccaatgccgcgagattgcccgggcg
catggattgaaatcgcccgccgatctatttgagcgctggctacaaaacggagcgctgctg
gtcaatgtggcgttaaccttttcttcaaacaaagataaaaaacaacattttttattctgg
catgaatttcaccaggcgctaattcaatcctttgcttcgctgcccgaacagccttatttt
attttgtggggtaaaaaagcgcaaaacctggaaagccgcatcttaaaagcgcttaaccag
ccggagcgaatcatcaaaagcggtcaccccacattcattcatcaatttttaaatgccgaa
cagcccgcctattctccttttaaagagattgaacaaaaaacgggttttagctggctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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