KEGG   Caldithrix abyssi: Cabys_3440
Entry
Cabys_3440        CDS       T04549                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03655  ATP-dependent DNA helicase RecG [EC:5.6.2.4]
Organism
caby  Caldithrix abyssi
Pathway
caby03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:caby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Cabys_3440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caby03400]
    Cabys_3440
Enzymes [BR:caby01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Cabys_3440
DNA repair and recombination proteins [BR:caby03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Cabys_3440
SSDB
Motif
Pfam: HATPase_c_4 SLFN_AlbA_2 HTH_24 HTH_11 HTH_AsnC-type AbiEi_4 HTH_DeoR MarR_2 FaeA HTH_20 HTH_17 HTH_Crp_2 SelB-wing_3
Other DBs
NCBI-ProteinID: APF20186
UniProt: H1XS80
Position
complement(4080057..4081397)
AA seq 446 aa
MILKESETVELKKSTSSLKQALISILAILNKHGGGELYFGVENSGQVVGQQVTESTLRQI
SQKISEGIEPKIFPLIEKVNLQGKVCIRIQFEGRERPYFAFGVAYIRVADEERKLSPNEL
KRFILERDIYSRRWDTELTDLPVEMIEKEVFNEFLSRAKEVNRLKLSTVDWRQNLNKLNL
IKNGKLTHAAKFLFTSAHDIEIQCAVFAGADRVTFLDFKKFEGNLFLLLEAAENYIKEKI
NWRVEFDETMKRKEVPEIPLAAVREALVNSLVHRDFANPKGNEIAIFKDRVEIYNPGTFP
PGLKPEDFISGKERSYLRNPKIAEIFYFTKDIERWGSGLERIHKACLSNGVTVKFNLLKT
GFLVTFERPELKSKDYGRTVEKTVGKTVEKILHAIKENPEITTLQLAELLGLSRRGIEWN
LARLKKQGKIKRIGPARGGHWQVVEK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgattctaaaagaatctgaaaccgttgagttaaagaagtcaacgagttcattaaagcag
gctttaatttccattttggccattctgaacaaacatggcgggggagagctctactttggc
gttgagaatagcggacaggtggtggggcaacaggttacggaaagcacattgcgtcagata
tcgcaaaagatttccgaaggtattgaaccaaaaattttccccttgatcgaaaaagtcaat
ttgcagggcaaggtatgtatccgcatacaatttgaaggcagggagcgcccctattttgcc
ttcggcgttgcttatatcagggtggcggatgaggagcgtaagctatcgcccaatgaattg
aaacgatttattttagaaagagacatctattctcgccgctgggatacggagttaacggac
ttaccggttgaaatgatcgagaaagaagtgtttaatgagtttttgagcagagcaaaagaa
gttaatcgattaaaattaagcacggttgactggcgccagaatttaaacaaactaaaccta
ataaaaaatggtaaattgactcatgccgcaaaatttctttttaccagtgcgcatgatatt
gaaattcaatgcgcggtttttgccggtgccgatcgtgtgacgtttctggattttaagaag
tttgagggaaatttatttttactgctggaggcggcggaaaattacattaaagagaagatc
aactggcgcgtcgaatttgatgaaacgatgaaacgcaaagaagtgccagaaattccgctg
gccgccgtgcgcgaggcgctggttaattcgctggtacatcgcgattttgccaatccaaag
ggaaatgaaatcgccatttttaaagacagagtggaaatttacaaccccggcacctttccg
cctgggctaaaaccggaagattttatcagcggcaaggaacgctcctatttgcgaaatccg
aaaattgcagagatattttattttaccaaagacattgaacgctggggcagtgggctggaa
agaatccacaaggcgtgtttaagtaatggcgttacggtaaagtttaatctgttgaagacg
ggttttttggttacttttgaaagaccagagctaaagtctaaagattatggcaggactgtg
gagaaaactgtgggaaaaactgtggagaaaattttgcatgctattaaagagaatcctgaa
ataacaacacttcaattggctgaattgctcggtttgagtagaagaggtattgaatggaac
ctggccaggttaaaaaaacaaggcaaaattaagcgcatcgggccggccaggggcgggcac
tggcaggtggtcgaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (91)   

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