KEGG   Clostridium acetobutylicum ATCC 824: CA_C2676
Entry
CA_C2676          CDS       T00056                                 
Name
(RefSeq) 16S rRNA pseudouridine(516) synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
cac  Clostridium acetobutylicum ATCC 824
Brite
KEGG Orthology (KO) [BR:cac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cac03009]
    CA_C2676
Enzymes [BR:cac01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     CA_C2676
Ribosome biogenesis [BR:cac03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CA_C2676
SSDB
Motif
Pfam: PseudoU_synth_2 S4 SocA_Panacea
Other DBs
NCBI-GeneID: 1118859
NCBI-ProteinID: NP_349283
UniProt: Q97FQ2
Position
complement(2794724..2795452)
AA seq 242 aa
MERLDKIISNMGYGSRKDVKKIIKDGRVKVDGEVVKDNNKQLDPQKSKIIVNGEEISYKK
YIYLMMNKPDGVISATSDDYDKTVIDLLEVEDQVFEPFPIGRLDKDTVGLLFLTNDGDFN
HRLISPKWHVDKVYYAKIDKDVTSEDVVAFKEGIVLDDGYKCMSAKLEVLNNSKEGSEVK
VTVREGKYHQVKRMFEAQGKKVVYLKRISFAGIKLDENLEEGEYRELTEDEMKAIKQKIK
MQ
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaagattagataaaatcatatcaaacatgggatatgggtctagaaaagatgtgaaa
aaaataataaaagatggaagagttaaggtagatggcgaagttgtaaaagataataacaag
caattagatccacaaaaatcaaagataattgtaaatggcgaagagatatcctataaaaaa
tacatatatttaatgatgaataagccagatggagtaatttcggctacttctgatgattat
gacaagacggtaatagatcttttagaggtggaggatcaagtatttgagccatttcctata
ggaagacttgataaagatactgttggacttctgtttttaactaatgatggtgatttcaat
cataggttaatatctcctaaatggcatgttgataaagtgtattatgccaaaatagacaaa
gatgtaacctctgaggatgtagtggcatttaaagaaggcatagtacttgacgatgggtat
aaatgtatgagtgctaaactagaggttttaaataattctaaagagggttcggaggttaag
gttactgtaagagagggaaaataccatcaggtaaaaaggatgtttgaagctcaaggtaaa
aaagtagtatatcttaaaagaataagttttgcaggaattaagctagatgaaaaccttgag
gaaggggagtatagagagcttacagaagatgaaatgaaggctataaaacaaaaaataaaa
atgcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system