KEGG C.acetobutylicum: CA

Clostridium acetobutylicum: CA_P0115

Entry

CA_P0115 CDS C.acetobutylicum

Gene name xynD

Definition endo-1,4-beta-xylanase

Class

SSDB

Motif Pfam: Glyco_hydro_43 CBM_6 Glyco_hydro_32N
PROSITE: ASP_PROTEASE CBM6

Other DBs NCBI-GI: 15004818
NCBI-GeneID: 1116120
JCVI-Pathema: CAP0115
UniProt: Q97TI6

Position pSOL:complement(121197..122573)

AA seq 458 aa
MKKASYIMAFSLAFALVSPVACHADNPVVQTLYTTDPAPMVYNGTCYLYTGHDEDGSTWY
TMKDWRCYSSTDMVNWTDNGSPLAYNTFSWAKGDAWAGQCIPRNGKFYYYVPVTQKSGGM
AIGVAVSNSPTGPFVDALGHPLAYTGTGDIDPTVFIDNDGQAYLYWGNPNLYYVKLNQDM
ISYSGKIVQVPLTTAGFGVRKGNSSRPTLYEEGPWFYKRNGMYYMVYAAGGIPEYISYST
SKSPTGPWYYKGVIMPSQGRSFTNHPGVIDFKGNSYFFYHNGALPGGSGFTRSVCIEQFK
YNADGTFPTINMTTTGVSGIGNLNPYTQNEAETICWESNVKTEKCSEGGMDVCNIQNNSW
IKVKGVNFDSGAASFNARVASATNGGNIELHLDSPSGTLIGTCHVNSTGGWQSWVTNSCN
VSGAKGIHDLYLKFTGGNGYLFNVNWWKFNGTKTVSTR

NT seq 1377 nt +upstreamnt +downstreamnt
atgaaaaaagcgtcttatataatggccttttcacttgctttcgctctagtttctccagta
gcatgtcatgcagataacccagtagtgcaaactctttatactactgatcctgctccaatg
gtatataacggtacttgttatttgtacactggtcatgatgaagatgggtcaacttggtac
actatgaaagattggcgatgttattcctcaacagacatggttaattggacggataatggc
tcaccattagcttacaatacatttagctgggcaaaaggtgatgcatgggctggtcagtgt
attcctaggaatggaaagttctactattatgttccggtaactcaaaaaagtggtggaatg
gcaataggtgttgcagtatcaaatagtcctactggaccttttgttgatgctcttggacat
cctttagcttatactggtacaggagatattgatcctacagtgtttatagataatgatggt
caagcttatttatattggggcaaccctaatctttattatgttaaactaaatcaagatatg
atttcatattcaggaaagattgtacaagtgcctttaactacagcaggctttggagtgcgt
aaaggaaattctagtaggccaactttatatgaagaaggtccatggttttataagcgaaat
ggaatgtactatatggtgtatgcagctggcggtatacctgaatatatttcttattccaca
agcaaaagtcctactggaccatggtattataaaggagtaattatgccttctcagggtcgc
agttttacaaatcatccaggtgtaatcgattttaaagggaattcttatttcttttatcat
aatggtgctttgcctggaggtagtggatttacacgttcagtgtgtattgagcaatttaaa
tataatgccgatggtacgtttcctacaataaatatgacgactacaggtgtttctggtatt
ggtaatttaaatccatacacccaaaatgaagctgaaacaatttgctgggaatcaaatgtt
aagactgaaaagtgcagtgaaggtggaatggatgtatgtaatatacaaaataacagctgg
ataaaagtaaaaggtgtaaactttgattctggtgcagcttcctttaatgcaagagtagct
tcagcaactaatggaggaaacattgaacttcatcttgatagtccatcaggaacacttatt
ggaacttgccatgttaatagtactggtggttggcaatcttgggttactaattcttgtaat
gtaagcggagcgaaaggtatacatgatttatatctaaaatttactggaggaaatggttat
ttatttaatgttaattggtggaagtttaatggtacaaaaactgtatcaactagataa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-PATHEMA-CAC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (14)

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