KEGG   Gottschalkia acidurici: Curi_c22700
Entry
Curi_c22700       CDS       T02255                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cad  Gottschalkia acidurici
Pathway
cad03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Curi_c22700 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cad03021]
    Curi_c22700 (rpoC)
   03400 DNA repair and recombination proteins [BR:cad03400]
    Curi_c22700 (rpoC)
Enzymes [BR:cad01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Curi_c22700 (rpoC)
Transcription machinery [BR:cad03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Curi_c22700 (rpoC)
DNA repair and recombination proteins [BR:cad03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Curi_c22700 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C RPOC_hybrid
Other DBs
NCBI-ProteinID: AFS79273
UniProt: K0AZP8
Position
complement(2380410..2383967)
AA seq 1185 aa
MEGRDNPLFELENFDSIKIALASPEKIRQWSKGEVKKPETINYRTLKPEKEGLFCEKIFG
PTKDWECHCGKYKRVRYKGVVCDRCGVEVIKAKVRRERMGHIELAAPVSHIWYFKGIPSR
MGLILDMSPRSLEKVLYFASYIVIDPGETSLSEKQLLNEGEYREAKENYDKAGQKFRAAM
GAEAVKELLAKIDLEKEAKELRSQLKDSTGQKKIRIIRRLEVVEAFRQSGNRPEWMILDV
VPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQE
AVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEL
KFYQCGLPKKMALELFKPFVMKKLVNENYAHNIKSAKRMVEKVKPVVWDVLESVIKEHPV
LLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHVPLSTEAQAEAR
FLMLSTNNILAPKDGKPITTPTQDMVLGSYYLTVENDEEIGTGMVFKDFEEMYMAYQNKA
VGLHARVKVRVKLSQDDRGKLVESTVGRFIFNEHIPQNLGFVDRSKDKYSLEIDTLVDKK
MLGKIVDKCYRKHGNTVTSIVLDHIKSTGFKYSTIGAITVSIEDIIVPEEKFVLIGEAEE
LVDKYEKSYRRGLISDEERYERVIEVWSKTTEKVTEALMSGLDEMNNIFIMAQSGARGSK
NQIRQLAGMRGLMANASGRTVEQPIRSNFREGLTVLEFFTSTHGSRKGLADTALRTADSG
YLTRRLVDVSQDVIIREEDCGTEEYLLARAFKDGKEVIEELWDRIEGRYSFEDVFDPNTG
EKIVGALELITEDIADKIIATGIEEVKIRTALACRTRHGVCSKCYGRNLATGTSVNIGEA
VGIIAAQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIITEIPGKV
TILESKRKREVTVTSGDGESRSYSIPYGSRIKVREGNVLEAGDEITEGSVNPHDILKIKG
EAGVQSYLVKEVQRVYRLQGVDINDKHIEVIVRQMLNKVKIEDSGDTDLLPGGLINTFEY
EKENERVESEGGKPAVGTTVLLGITKASLATESFLSAASFQETTRVLTEAAIKGKEDNLI
GLKENVLIGKLIPAGTGMKRYKSIAINTEEKDEIEEEINVDTITN
NT seq 3558 nt   +upstreamnt  +downstreamnt
atggaagggagagataaccccttgtttgaacttgaaaattttgattcaataaaaattgct
ttagcatccccagagaagataagacaatggtctaaaggggaagttaaaaaaccagaaact
attaactataggacgctaaaaccagaaaaagaaggattattctgtgaaaaaatatttgga
cctactaaagactgggagtgtcactgtggtaagtataaaagagtaagatataaaggtgta
gtatgtgacagatgtggagtagaagtaataaaggccaaagtaagaagagaaagaatggga
catatagaattagcagctccagtttctcatatttggtactttaaaggaataccaagtaga
atgggacttatattagatatgtctccaagatcgctagagaaagtattgtactttgcatct
tatatagtaatagatccgggtgaaacttctctttcagagaaacagcttttaaatgaaggc
gaatatagagaggctaaagagaactatgataaagctggccagaagtttagagctgctatg
ggagcagaagctgtaaaagaacttttagctaaaatagacttagaaaaagaagccaaagaa
ttaagaagtcagcttaaagacagtacaggacagaagaaaataagaataataagaagatta
gaagttgtagaggcattcagacaatctggaaatagaccagaatggatgatcttagatgta
gtaccagttataccacctgacttaagacctatggtccaattagatggtggtagattcgca
acttcagacttgaatgacctatatagaagagttataaatagaaataatagacttaaaaga
cttctagacttaggagctccagatataattgtaagaaatgaaaagagaatgttacaagaa
gctgtggatgctcttatagacaatggtagaagaggaagacctgtaactggtccgggaaat
agacctttaaaatctctttcagatatgcttaaaggtaagcaaggtagattcagacaaaac
ttacttggaaaaagggtagattattcagggcgttcggttatagtagttggtccagaacta
aaattctatcaatgtggtcttcctaaaaaaatggcactagagctatttaaaccatttgta
atgaaaaaattagtaaatgaaaattatgctcataatattaagagtgcaaaaagaatggtt
gagaaagttaagccagtagtatgggatgttttagagtctgtaataaaagagcatccagta
ttactaaaccgtgcaccgacattacacagactgggaatacaagcatttgaacctatacta
gtagaaggaaaagctataaagctacatccactagtatgtacagcttataacgctgacttt
gatggtgaccaaatggcagtacacgttccactatcaacagaggcacaggctgaggcaaga
ttcttaatgctttcaactaataatattttagctcctaaagatggtaagcctataactact
ccaactcaagatatggtactaggaagttactatttgacagttgagaatgatgaggaaata
ggaactggtatggtatttaaagactttgaggaaatgtatatggcataccaaaataaagcc
gttggacttcatgctcgagttaaggtaagagtaaagctttcacaagatgatagaggaaag
cttgtagaaagtactgttggtagatttatatttaatgaacacataccgcaaaatttagga
ttcgttgatagaagtaaagataaatactcactagagatagataccctagttgataagaaa
atgctaggaaagatagtagataagtgctacagaaaacatggaaacactgtaacttcaata
gttttagaccatatcaaatctacaggattcaaatattctacaataggagctattacagtt
agtatagaagatattatagttccagaagaaaagtttgttcttataggagaagcagaagaa
ctagtagataagtatgaaaagtcttatagaagagggcttatatcagatgaagaaagatat
gagagagttatagaggtatggagtaaaactactgaaaaagttactgaagctcttatgagt
ggattagatgaaatgaataatatattcataatggcacaatcaggagcgagaggtagtaaa
aatcagataagacagcttgcgggtatgaggggtcttatggcaaatgcttcaggtagaaca
gtagagcagcctataagatctaactttagagaaggacttacagttcttgaattctttact
tcaactcacggttctcgtaaaggtcttgcagatacggcactaagaactgccgattcagga
tatttaactagaagattagttgatgtcagtcaagatgttataataagagaagaagattgt
ggtacagaagaatatctattagcaagagcatttaaagacggaaaagaagttatagaagaa
ctatgggatagaatcgaaggtagatatagctttgaagatgtgtttgatcctaatacggga
gaaaaaatagtaggagctctagaattaattacagaagatatagctgataaaataatagct
actggaatagaagaagttaagataagaactgcactagcatgtagaactagacatggtgtt
tgttcaaaatgttatggtagaaacttagcaacaggaacatctgttaatataggagaagca
gtaggtataatagctgcacaatcaataggggagcctggtacacaacttactatgcgtact
ttccatacaggaggagtagcaggagcagatattacacagggtcttccaagggtagaagag
ttatttgaagctagaaaaccaaaaggtcttgcgattataacagaaataccaggaaaggtt
acaatacttgaatcaaaaagaaaaagagaagtaaccgtaacatctggagatggagaatca
agaagttacagcataccatatggttcaaggattaaagttagagaaggaaatgtactggag
gctggagatgaaattacagaaggttcagtaaatccacatgatattttgaagataaagggt
gaagctggagttcagtcatatcttgtaaaagaagttcaaagagtttatagacttcaaggt
gttgatataaacgataaacatatagaagttatagttagacaaatgttgaacaaggttaaa
atagaagattcaggagatacagatttattaccaggaggacttataaatacatttgaatat
gaaaaagaaaatgaacgtgtagagtctgagggtggaaaaccggctgttggtacaacggta
ttattaggtattaccaaagcatctttagctactgagtcattcttatcagcagcttcattc
caagaaacaacaagagtattaactgaagcagctataaaaggaaaagaagataacttaata
ggactgaaagaaaatgttcttataggtaagttaattcctgcaggaacagggatgaaaaga
tataaaagtatagctataaatacagaagaaaaagatgaaattgaagaagagataaatgtt
gacactataactaactga

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