KEGG T01548: SMB

Clostridium acetobutylicum DSM 1731: SMB_G2890

Entry

SMB_G2890 CDS T01548

Gene name

yrrC

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cae Clostridium acetobutylicum DSM 1731

Pathway

cae03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cae03440]

SSDB

Motif

Pfam:

HHH_4 AAA_30 UvrD_C_2 AAA_19 HHH_5 AAA_11 Viral_helicase1 Helicase_RecD PIF1 PhoH UvrD_C AAA_23 HHH_2 AAA_28 AAA DUF2075 HHH_3 AAA_22 UvrD-helicase SMC_N DUF853 NTPase_1

Other DBs

NCBI-GI:

337738062

NCBI-GeneID:

10850482

UniProt:

F7ZVS4

Position

complement(2988739..2990958)

AA seq 739 aa
MVELRCVIEAVVFKNEENGYVVANANAEGKDKITIVGCIPYIMEGQSLKISGEWIVHPQF
GKQFKIERCEEILPNSLLGIEKYLASGIISGIGPVTAKKIVNKFGEKTLEILDNDIYRLS
EIEGIGKKKIDKIYEAYSEQREVRNIMIFLQNYGVTPKQCVKIYNHYKSKAIEVVKQNPY
ILVEEISGIGFKTADKIARSLGIQGNSPFRIESGVCYVINEFCALGNTYMPIDKLVKNCI
NVLNVKKEEVEKAIYECTLSQKIKVEIINGENCVFTMEYYYCEIGITRKIITLAYDSYKS
LEIDVDQKIIQFENENKIKFAPSQVEAIEGAFSNGIEVITGGPGTGKTTIIRCITYIFEE
LNMKVFMAAPTGRAAKRMSESTGREAKTIHRMLELGYEDEVFFDNNNYSTLQCDVVIIDE
ASMIDVVLMNSLLKSIGMGTRVIIVGDVDQLPSVGPGNVLRDIIESKCVKVIRLNNIFRQ
AKESMITVNAHKINSGEMPLLNKKDKDFYFIREDNAEAITNTIISLVYKRLPLFNKSWKA
ARDIQVLAPMKKGIAGVANLNVSLQSIINPPHKSKDEIKFRDNIFRVGDKVMQIKNNYML
KWNRINGDGEKTGEGVFNGDIGFISNIDEDNNVIVIFDDEKEVTYERINLDELELAYAIT
IHKSQGSEFPVVVLPMTMGPPLLMNRNLLYTGITRAKQLVVIVGFPKAIKFMIDNDKSFE
RYSGLKWRIEDIIKEESEE

NT seq 2220 nt +upstreamnt +downstreamnt
atggtagaacttcgttgtgttattgaagctgttgtgttcaaaaatgaagaaaatgggtat
gttgttgcaaacgcaaatgcagaaggaaaagataaaattacaattgttggatgcataccg
tatattatggaaggccaatctttaaagatttcaggagaatggattgttcatccacagttt
ggaaagcaatttaaaattgaacgctgcgaagaaatactacctaattctttattaggtata
gaaaaatatttggcatcaggaattatatcgggaataggtcctgtaacagcaaaaaagata
gttaataaatttggagaaaaaactcttgagatattagataatgatatatatagattaagt
gaaatagagggaataggtaaaaagaaaatagataaaatatatgaggcgtattcagaacaa
agagaagtaagaaatattatgatttttcttcagaattatggcgttacgcctaaacaatgt
gtgaaaatatataatcactataaatctaaggctatagaggttgtgaaacaaaacccatat
attcttgtagaagagatatcaggaataggttttaagacggcagataaaatagctcgtagt
cttggaatacaaggaaactctccatttagaattgaaagtggagtatgttatgtaataaat
gaattttgtgctttaggtaatacatatatgcctatagataaacttgtaaagaactgtatt
aatgtattaaatgtaaaaaaagaagaggttgaaaaagcaatatatgaatgtactctttct
caaaagataaaggttgaaataataaatggggaaaattgtgtttttacaatggaatattac
tattgtgagataggaataacaagaaagataataactcttgcctatgatagttataaaagc
ttagagatagatgtagaccaaaagataatacagtttgaaaatgaaaataaaataaaattt
gcaccatcacaagtagaagctattgaaggagcgttttcaaatggtatagaagtaataaca
ggagggcctggtacaggtaagacaacaataataagatgcataacatatatatttgaagaa
ttaaatatgaaggtatttatggcagcacctacaggaagagctgcaaaaagaatgtccgaa
tcaacaggtagggaggccaagaccatacatagaatgctggagcttggatatgaagatgag
gtgttttttgataataataactatagtacacttcaatgtgatgttgtaataatagacgag
gcatcaatgatagatgttgttttaatgaacagtctattgaagtcaataggtatgggtact
agggttattatagttggtgatgtagaccagcttccttctgtgggacctggaaatgtgctg
agagatataattgaaagtaaatgtgtaaaggtcattagattgaataatatttttaggcaa
gcaaaggaaagtatgattacagtgaatgcgcataaaatcaatagtggtgaaatgcccctt
ctaaataaaaaggataaggatttttattttatacgagaagataatgcagaagctataacc
aatactataattagtttggtttacaagagactgccactttttaataagtcttggaaggct
gctagggatatacaagtgttagcacctatgaaaaaggggatagcaggtgttgcaaactta
aatgtaagtcttcaaagcattattaatcctcctcataaaagtaaagatgaaataaaattt
agagataatatatttagagttggcgacaaggttatgcaaataaaaaacaattatatgtta
aaatggaatagaataaatggagatggcgaaaagacaggagaaggagtttttaatggagat
atagggtttataagtaatatagatgaggataataatgtgatagttatttttgatgatgaa
aaagaggttacatatgaaagaattaacttagatgaacttgaacttgcatatgcaataact
atccataaaagccagggaagtgaattcccagtagtggttcttcctatgactatggggcca
cctcttctgatgaataggaaccttctttatacaggaattacaagagcaaagcagctagtt
gtaatagttgggtttccaaaagcaataaaatttatgatagataacgataaaagttttgaa
agatattcaggtctcaaatggagaatcgaagatataataaaagaagagagtgaggagtga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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