KEGG T05143: CSV91

Collinsella aerofaciens: CSV91_00065

Entry

CSV91_00065       CDS       T05143

Name

(GenBank) DNA topoisomerase

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

caer Collinsella aerofaciens

Brite

KEGG Orthology (KO) [BR:caer00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caer03032]
    CSV91_00065
   03400 DNA repair and recombination proteins [BR:caer03400]
    CSV91_00065
Enzymes [BR:caer01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CSV91_00065
DNA replication proteins [BR:caer03032]
Prokaryotic type
  DNA Topoisomerases
   CSV91_00065
DNA repair and recombination proteins [BR:caer03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CSV91_00065

SSDB

Motif

Pfam:

DNA_gyraseB Toprim DNA_gyraseB_C HATPase_c ARMET_N

Other DBs

NCBI-ProteinID:

ATP53078

UniProt:

A0A2D1TUN8

Position

complement(11474..13471)

AA seq 665 aa
MAKHTANYGNDSIRQLKDEERVRLRPAVIFGSDGLDGCAHAAFEILSNAVDEARQGYGKL
ITLTAFRDGSIQVEDNGRGCPLDWNPSEKRFNWELVFCELYAGGKYNNNQGGDYDFSLGT
NGLGSCATQYASEYMDVTVWRDGNKYSLHFKKGKVVGAKKKALEIEPSDEDRTGTTIKWR
PDLEVFTSISIPHDWYRETMRRQAVVNANVTFRLRIEGDDGEFTEEDFCYPKGIEDYVLE
KVGTDYLTEPFFIEADRRGRDREDLPDYNVKITACMCFSRTFTMQEYYHNSSWLENGGSP
EKAARSALTSAIDAYIKQQGKYNKNESGIKWQDVQDCLVLVTNCFSTQTSYENQTKKAIN
NRFIQQAMTAFFKERLSTYLIENKDAANKIMEQVLINKRSRENAEKTRQSIKTNLQQKTD
MANRVQKFIDCRSKDKDRREIYIVEGDSAAGAIRTSRDAEFQGVMPVRGKILNCLKEDYP
RIFKSDIIMDLMRVLGCGVEIKDKRIKNLGAFDLDNLNWNKVIICTDADVDGYHIRTLVL
TMLYRLVPTLIDEGYVYIAESPLYEINCKEKTYFAYTELEKNGILKEIGEQKCSINRSKG
LGENDPDMMWLTTMNPETRRLIKVEPEDVTKMETMFNLLLGNDEAGRKRHISEHGKEYLD
QLDLQ

NT seq 1998 nt +upstreamnt +downstreamnt
atggcaaaacacaccgcaaactatggtaacgacagtattcgtcagctcaaggacgaagag
cgcgtacgcctgcgccccgccgtcatctttggctcggacggactcgatggctgcgcgcat
gccgccttcgagatcctgtccaacgccgttgacgaggcgcgccagggctacggcaagctc
atcacccttaccgcctttcgcgatggttccattcaggtagaggacaacggccgcggctgc
ccgctcgactggaacccttccgagaagcgctttaactgggagctcgtcttttgcgagctc
tacgccggcggcaaatacaacaacaaccagggcggcgactacgacttctcgctcggcacc
aacggcctgggctcctgcgcgacccagtatgcctccgagtacatggacgtcacggtttgg
cgcgacggcaacaagtactccctgcactttaagaagggtaaggtcgtcggcgccaaaaag
aaggcactcgagattgagcccagcgatgaggaccgtaccggcaccaccatcaagtggcgc
cccgatcttgaggtctttacctccatcagcatcccccacgattggtatcgcgagaccatg
cgccgccaggccgtggtcaacgccaacgtgaccttccgcctgcgcattgagggcgacgat
ggcgagtttaccgaagaggacttttgctatcccaagggcatcgaggactatgtgctcgag
aaggtcggcaccgactacctcaccgagcccttctttatcgaggccgaccgccgcggtcgc
gaccgcgaggacctgcccgactacaacgtaaagatcaccgcgtgcatgtgcttctcgcgc
accttcacgatgcaggagtactaccacaactcctcatggctcgagaacggcggttcgccc
gagaaggcagcccgcagtgctctgactagcgccatcgacgcctacatcaagcaacagggc
aagtacaacaaaaacgagagcggcatcaaatggcaggacgtccaggactgcctggtgctg
gtgaccaactgtttctccacccagacgtcctacgaaaaccagactaagaaggccatcaac
aaccgctttatccagcaggccatgactgccttctttaaggagcgcctctcgacctacttg
atcgagaacaaagacgctgccaacaagatcatggagcaggtgctcatcaacaagcgctcg
cgcgagaacgccgagaagacgcgccagagcatcaaaaccaacctgcagcagaagaccgac
atggccaaccgcgtgcagaagttcatcgactgccgctccaaggacaaggaccgtcgcgag
atctacatcgtagagggcgactcggcagcaggcgccatccgcacctcgcgcgatgccgag
ttccagggtgttatgcccgtccgaggcaagatcctcaactgcctgaaagaggactacccg
cgcatctttaagtccgacatcatcatggacctcatgcgcgtgctgggctgcggcgtggag
atcaaagacaagcgcatcaagaaccttggtgccttcgacctagacaacctcaactggaac
aaggtcatcatctgtacggacgccgacgtcgacggttaccacatccgcacgctcgtactc
accatgctctatcgactggtgcccacgcttatcgacgagggctacgtgtatatcgccgag
tcgccgctctacgagatcaactgcaaagagaagacctactttgcctacaccgagctcgaa
aagaacggcatcctcaaggagattggcgaacagaagtgctcgatcaaccgctccaagggt
cttggtgagaacgatccggacatgatgtggctcaccaccatgaaccccgagacgcgccgc
ctgatcaaggtggagcccgaggacgtcaccaagatggaaaccatgttcaacctgttgctg
ggcaacgacgaggcgggccgtaagcgccacatctccgagcatggcaaggaatacctggac
cagctggacctgcaatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (73)   

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