KEGG   Catenulispora acidiphila: Caci_5866Help
Entry
Caci_5866         CDS       T00967                                 
Gene name
ligC
Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
cai  Catenulispora acidiphila
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:cai03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cai03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cai03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:cai03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(6773821..6774930)
Genome map
AA seq 369 aa AA seqDB search
MAEVNLPVLPPVEPMLAKSAAKVPTGDYLYEPKWDGFRCIVFRDGDRVVLGSRGGKELGR
YFPELVESLKEALPARCVVDGEIVVVVDSRLDFDRLSDRIHPAASRVKLLAERTPASFIG
FDLLALGDRDLTAEPFADRRAALLSAVAKHEYVHVTRATDDPELAATWFQHFEGAGLDGV
VAKPSQGAYTPGERSMVKIKHERTADVVVAGYRLHKTGPIVGSLMLGLYGEDGILNYVGG
SSAFTMARRKELIDELAPYLLPEGESHPWVDAPDEGDGDSGSGSGSDSEHRRPGTLNRWN
AGKDVSFIALRPELVCEVRYDQLQGDRFRHNGRFVRWRPDRDAASCSYEQLDVPAAYDLA
DVFGDAGQD
NT seq 1110 nt NT seq  +upstreamnt  +downstreamnt
gtggccgaggtgaacctgccggtgctgcccccggtcgagccgatgctggccaagtccgcc
gcgaaggtcccgaccggcgactacctgtacgagcccaagtgggacggcttccgctgcatc
gtcttccgcgacggcgaccgggtcgtgctcggcagccgcggcggcaaggagctggggcgc
tacttcccggagctcgtcgagtctttgaaggaagcgctgccggcgcgctgcgtcgtggac
ggcgagatcgtggtggtcgtggacagccgcctggacttcgaccggctcagcgaccgcatc
caccccgccgcctcccgggtgaagctgctcgccgagcgcaccccggcctccttcatcggc
ttcgacctgctcgcgttgggcgaccgcgacctgaccgccgagcccttcgccgaccgccgc
gccgcgttgctcagcgccgtcgccaagcacgagtacgtgcacgtcacccgcgccaccgac
gacccggagctggccgcgacctggttccagcacttcgagggcgccggcctggacggcgtc
gtcgcgaagccctcgcagggtgcgtacacccccggcgagcgcagcatggtgaagatcaag
cacgagcgcaccgccgacgtggtcgtcgccggctaccgcctgcacaaaaccggcccgatc
gtcggctccctgatgctcggtctctacggcgaggacggcatcctgaactacgtcggcggc
tccagcgccttcaccatggcgcgccgcaaggagctgatcgacgaactggcgccgtacctg
ctgcccgaaggcgagtcgcacccctgggtcgacgcccccgacgaaggcgacggcgacagt
ggcagcggcagcggcagtgacagcgagcaccgccgccccggaaccctgaaccgctggaac
gccggcaaggacgtctcgttcatcgccctgcgccccgagctggtctgcgaagtgcgctac
gaccagctgcagggcgaccggttccggcacaacggacgcttcgtgcgatggcggccggac
cgcgatgccgcgtcgtgctcctacgagcagctggacgtgccggccgcctatgacctggca
gatgtcttcggcgacgccgggcaggactga
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