| Entry |
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| Definition |
(GenBank) helicase, RecD/TraA family
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| KO |
| exodeoxyribonuclease V alpha subunit [EC: 3.1.11.5] |
|
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| Organism |
cai Catenulispora acidiphila
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| Pathway |
|
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| Brite |
KEGG Orthology (KO) [BR:cai00001]
Genetic Information Processing
Replication and repair
03440 Homologous recombination
Caci_6026
Enzymes [BR:cai01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Caci_6026
DNA repair and recombination proteins [BR:cai03400]
Prokaryotic Type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Caci_6026
 |
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-ProteinID: JGI: UniProt: |
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| Position |
6945319..6947547
 |
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| AA seq |
742 aa  
MAAPTTEPHGTLSVVEGVLERITFANEETGYTVARVDTGHGAADLLTVVGALLGAQPGES
LRMRGRWGSHPQYGKQFMVDNYTQVLPATVAGIQKYLGSGLIKGIGPKTAEKIVGHFGVD
TLTVIDETPARLIEVPTLGPKRTKLIAAAWIEQKAIKEVMVFLQSVGVTTSISVRIYKEY
GDASIDVVKQEPYKLASDVWGIGFKTADAIAVAVGIPHDSPERVKAGIQYALSQSSDAGN
CYLPREKLLEESVKILTVPTELTSHCLDELIEAEGVVAEDIPDPDGYDPDEPIRAIYLVP
FHRAEASLAAQLRRLLEAPDDRLASFATVDWDKALGWLKDRTGADLAPEQTAAVQQALTA
KVSVLTGGPGCGKSFTVRSIVELAQAKRARVVLAAPTGKAAKRLTELTGAEAMTVHRLLE
LKPGGDAAYDRDRPLEADLVVVDEASMLDVLLANKLVKAVAPGAHLLLVGDVDQLPSVGA
GEVLRDLLAAPRVPRVRLTQVFRQAQQSGVVVNAHRINSGKPLELKGFDDFFLFVEDETE
DAARVAVELATTRIPKRFGFDPRRDIQVLTPMHRGPAGAGTLNGLLQETLTPSQPSRPEK
RFGGRTFRVGDKVTQIRNNYDKGKNGVFNGTGGVITSMLLEEQTLVVHTDEDEEVTYEFA
ELDELQHAYAMTVHRSQGSEYPVVVVPVTMSAWMMLQRNLLYTAVTRAKKLVVLVGSKRA
LAQAIRTMSAGKRFTGLDYRLR |
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| NT seq |
2229 nt  +upstreamnt +downstreamnt
ttggccgcaccgaccaccgagccccacggcaccctgtcggtcgtcgagggcgtgctggag
cggatcaccttcgccaacgaggagaccggctacaccgtcgcgcgcgtcgacaccggccac
ggcgccgccgacctgctgacagtggtcggcgcgctgctcggcgcgcagcccggcgaatcg
ctgcggatgcgcggccgctggggctcgcatccgcagtacggcaagcagttcatggtcgac
aactacacgcaggtcctcccggcgaccgtcgcgggcatccagaagtacctgggctccgga
ctcatcaagggcatcggcccgaagaccgccgagaagatcgtcggccacttcggcgtggac
acactcacggtcatcgacgagacgccggcccgcctgatcgaggtcccgaccctgggaccg
aagcgcaccaagctcatcgcggcagcgtggatcgagcagaaggccatcaaagaggtcatg
gtcttcctgcagtcggtcggggtgaccacatcgatctcggtgcggatctacaaggagtac
ggcgacgcctcgatcgacgtcgtgaaacaggagccttacaagctcgcctcggacgtgtgg
ggcatcggcttcaagaccgccgacgcgatcgcggtggctgtcggcatcccgcacgactcg
ccggagcgcgtaaaggccggcatccagtacgcgctatcgcagagctctgacgctggtaac
tgctatctgccacgcgagaagctcctggaggagtctgtcaaaatcctgacggtccccacc
gagctcacctcccactgccttgatgaactcatcgaggcagagggagtcgtcgccgaggac
atcccggatcccgacggctacgaccccgacgagccgattcgcgccatctacctcgttccc
ttccaccgcgccgaagcctcgctggccgcccagctacggcgcctgctggaggcgccggac
gaccgcctcgcctcgttcgccacggtcgactgggacaaggctctgggctggctgaaggac
cgcaccggcgccgacctcgcgccggagcagaccgcggcggtgcagcaggcgctgacggcg
aaagtcagtgtcctgaccggcggcccgggctgcggcaagtcgttcacggtgcgctcgatc
gtggagttggcgcaggccaagcgggcgcgcgtggtcctggccgccccgaccggcaaggca
gccaagcgcctgaccgagctgaccggcgccgaggcgatgaccgtgcaccgcctgctggag
ctcaagccaggcggggacgccgcgtacgaccgggaccggccgctggaggccgacctcgtg
gtggtggacgaagcctcgatgctggacgtcctgctggcgaacaaactggtcaaggccgtc
gcccccggcgcacacctgttgctggtcggcgacgtggaccagctcccctccgtcggcgcc
ggcgaggtgctgcgcgatctcctagccgcgccccgagtgccccgcgtacgcctgacgcaa
gtcttccgccaggcgcaacagtccggcgtcgtggtgaacgcgcaccggatcaactcgggg
aaaccgttggagctcaagggattcgacgacttcttcctgttcgtcgaggacgagaccgag
gacgccgcacgcgtcgccgtcgagctggccacgacccgcatccccaaacgcttcggcttc
gacccccgccgcgacatccaggttctgactcccatgcaccgcggcccagccggcgccgga
accctcaatgggctcctgcaagaaacgctgaccccctcccagccctcgcgccccgagaag
cgcttcggcggccgcaccttccgcgtcggcgacaaggtcacgcagatccgcaacaactac
gacaagggaaagaacggcgtcttcaacggcaccggcggcgtcatcacctccatgctcctg
gaggagcagaccctggtggtacacaccgacgaggacgaagaggtgacgtatgagttcgcg
gagctggacgagctacagcacgcctacgccatgacagtgcaccgatcgcagggctctgaa
taccccgtagttgtggtccccgtgacaatgagcgcctggatgatgctgcaacgaaacctg
ctctacacggcagtcacgcgcgcgaagaagctggtggtcctggtcggctcgaaacgcgcc
ctggcacaagcgatccgcacgatgtccgcaggcaaacgcttcaccggcctggactaccgc
ctgcgatga |
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