KEGG T00967: Caci

Catenulispora acidiphila: Caci_7941

Entry

Caci_7941 CDS T00967

Definition

ECF subfamily RNA polymerase sigma-24 subunit

Orthology

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

cai Catenulispora acidiphila

Class

SSDB

Motif

Pfam:

Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28 DUF742 GerE HTH_29

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(9214479..9215285)

AA seq 268 aa
MVMSAVLEIGGGDVVADANSARNPGAVPVNTIGPRIDLGELRRRRAARKAALEKNRRGAE
AIPDTAMPAEAAQSVGETQPLDAAAVGWEPPSWDDIVRTHSQRVYRLAYRLTGNQHDAED
LTQEVFIRVFRSLSSYQPGTFEGWLHRITTNLFLDMVRRRARIRFDSLGEDADDRLPGRE
PSPERIFVDSHMDADIEAALAALAPEFRAAVVLCDIEGLSYEEIAATLDVKLGTVRSRIH
RGRSQLRAALEHRAPGAAANASGKEGRR

NT seq 807 nt +upstreamnt +downstreamnt
atggtgatgagtgcggtactggaaataggaggtggggacgtcgtggctgacgccaacagc
gcccgcaatcctggagccgtcccggtcaacaccattggaccgcggatagatctcggggaa
cttcgtcggaggcgtgcggcccgcaaggccgccttggagaagaaccgccggggggcggag
gcgatccccgataccgcgatgcccgccgaggcagcgcagagcgtgggggagacccaaccc
ctcgacgccgcggccgtcggctgggagccgccgagctgggacgacatcgtccggacccat
tcgcagcgggtgtaccggctggcctaccgcctgaccggcaaccagcacgacgccgaggac
ctcacgcaagaggtcttcatccgcgtcttccgctcgctgtccagctaccagccgggcacc
ttcgagggctggctgcaccgcatcacgacgaacctgttcctggacatggtgcgccgccgc
gcccgcatccgcttcgactccctgggcgaggacgccgacgaccggctgcccggccgcgag
ccctcgccggagcggatcttcgtggactcgcacatggacgccgacatcgaggccgcgctg
gccgcgctggcgccggagttccgggcggccgtggtgctgtgcgacatcgaggggttgtcc
tacgaggagatcgcggccaccctcgatgtgaagctcggcaccgtgcgctcgcggatccac
cgcggccgctcgcagctgcgagcggccctggagcaccgggccccgggcgcggccgcgaac
gcgagtgggaaggagggccgccggtga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CAI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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