KEGG   Catenulispora acidiphila: Caci_8107
Entry
Caci_8107         CDS       T00967                                 
Name
(GenBank) helicase domain protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
cai  Catenulispora acidiphila
Pathway
cai03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Caci_8107
  09124 Replication and repair
   03420 Nucleotide excision repair
    Caci_8107
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cai03021]
    Caci_8107
   03400 DNA repair and recombination proteins [BR:cai03400]
    Caci_8107
Enzymes [BR:cai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Caci_8107
Transcription machinery [BR:cai03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Caci_8107
DNA repair and recombination proteins [BR:cai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Caci_8107
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD AAA_22
Other DBs
NCBI-ProteinID: ACU76930
UniProt: C7QIN0
Position
9401925..9403571
AA seq 548 aa
MTCLIVQSDKTLLLEIDHPQAEECRRDIAPFAELERSPEHIHTYRVTPLALWNARAAGHD
AEQVIDALLRHTRYPVPHSLLVDIADTMDRYGRLRLLQHPTHGLVLETTDVPVLEEVIRH
KKVQPLIGARLDEHTIKVHPSERGTLKQVLLKVGWPAEDLAGYVDGEHHDIALREDGWTL
RPYQKDAAEGFRHGGSGVIVLPCGAGKTIVGAAAMAGVEATTLILVTNTVSVHQWRKELL
KRTTLTDEEIGEYSGARKEIRPVTIATYQVLTRKTKGVYANLELFDARDWGLIVYDEVHL
LPAPVFRFTADIQSRRRLGLTATLVREDGLEGEVFSLIGPKRFDAPWKDIEAQGYIAPAD
CVEVRVTLTDHERLRYASSEPEEKYRIASTTATKSTLVEALVKKHAGEPTLVIGQYLEQL
DDLGARLNAPVLKGSTTVKERERLYEGFRTGEIPTLVVSKVANFSVDLPEASVAIQVSGT
FGSRQEEAQRLGRVLRPKADGRGARFYAVVSRDTVDQEYAAHRQRFLAEQGYAYRIADAD
DVFAGKDI
NT seq 1647 nt   +upstreamnt  +downstreamnt
gtgacctgcctgatcgtccagtccgacaagaccctcctgctcgagatcgaccacccgcag
gccgaggagtgccgccgggacatcgccccgttcgccgagctggagcgctcgccggagcac
atccacacctaccgcgtcacgccgctggcgctgtggaacgcgcgcgccgccggccacgac
gccgagcaggtcatcgacgcgctgctgcgccacacccgctacccggtgccgcactcgctg
ctggtcgacatcgccgacaccatggaccgctacggccgcctgcggctgctgcagcacccg
acgcacggcctggtcctggagaccaccgacgtcccggtgctggaggaggtgatccgccac
aaaaaggtgcagccgctgatcggcgcccggctcgacgagcacaccatcaaggtccacccc
tccgagcgcgggaccctgaagcaggtgctgctgaaggtcggctggccggccgaggacctg
gcgggctacgtggacggcgagcaccacgacatcgccctgcgcgaggacggctggaccctg
cgtccgtaccagaaggacgccgccgagggcttccgccacggcggctccggcgtgatcgtg
ctcccctgcggcgcgggcaagaccatcgtcggcgcggcggccatggccggggtcgaggcg
acgacgctgatcctggtcaccaacaccgtcagcgtccaccagtggcgcaaggaactgctc
aagcgcaccacgctgaccgacgaggagatcggcgagtattcgggcgcccgcaaggagatc
cgcccggtcaccatcgccacctaccaggtcctcacgcgcaagacgaagggcgtctacgcc
aacctggagctgttcgacgcccgcgactggggactgatcgtctacgacgaggtccacctg
ctgccggcgccggtcttccgcttcaccgccgacatccagtcccgccgccgcctcggactg
acggccaccctggtccgtgaagacggcttggaaggcgaggtcttctcgctgatcggtccc
aagcgcttcgacgccccgtggaaggacatcgaggcgcagggctacatcgccccggcggac
tgcgtcgaggtccgcgtcaccctcaccgaccacgagcgcctgcgctacgccagctccgag
ccggaggagaagtaccgcatcgcctcgaccacggcgaccaagtccacgctcgtggaagcc
ctggtgaagaagcacgccggcgagcccaccctggtcatcggccagtacctggagcagctg
gacgacctcggcgcgcggctgaacgccccggtcctgaagggcagcaccacggtgaaggag
cgcgagcgcctgtacgagggcttccgcaccggcgagatccccaccctggtggtctcgaag
gtcgcgaacttctccgtcgacctgcccgaggcgagcgtggcgatccaggtgtccggcacg
ttcggctcccgccaggaggaggcgcagcggctgggacgcgtgctgcgcccgaaggccgac
ggccgcggcgcgcgcttctacgccgtggtctcccgcgacaccgtggaccaggagtacgcg
gcgcaccggcagcggttccttgcggagcaggggtacgcataccggatcgccgacgccgac
gacgtgttcgccggcaaggacatctaa

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